PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137100.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 555aa MW: 62919.2 Da PI: 6.2059

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.3	4.4e-16	31	119	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv+ d ++++ l++p fa++ + +k+++led+ g++W+v++ + + g+ ++kGW+ F +++ L+ gDfv+F ++ + +++v+ XP_022137100.1 31 FFKVM-FGDLFSQA-LYFPPMFAATVPML--ANKKVVLEDSLGQQWKVTV--SDCEGSLAFKKGWSAFSSEHSLEIGDFVIFNHIM--DLHFKVS 117 56666.44555555.******999544..3568***********..*****************************775..4544777 PP EE CS B3 96 vf 97 ++ XP_022137100.1 118 IY 119 76 PP
2	B3	38.1	2.7e-12	483	551	27	97
---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++e+++ + l+d++ r W + + ++ vlt+GW+ F++ n+++ gD ++F+l+++ e+ + v+++ XP_022137100.1 483 RRNPEKKRLVFLRDPRKRLWPMLY--HEMPNVQVLTSGWEAFCSVNQIEPGDECLFHLEDEPERIYQVSIR 551 556778889*************..9*****************************9987777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MGSKVEACMD CTQRCLQLHR KANSLSSVTS FFKVMFGDLF SQALYFPPMF AATVPMLANK 60 KVVLEDSLGQ QWKVTVSDCE GSLAFKKGWS AFSSEHSLEI GDFVIFNHIM DLHFKVSIYT 120 KTGCEKVEFA KRGNMRKRTR STYPVLEKTN EGLKNPQASG TSVGSGSNVA LSQDKCNMTS 180 SQNVNVNRDK RPKYQSHDEC HKPLCKTEIF DDSYNFINQN KDVGLEENRS PLVDLFSMEI 240 PGTENATNKV AVDELNPNCA STLQKATIDV HPVVNAEVLP FPLNISANEI IEKSQCFEEA 300 DRNISGSDND SCHDKTIEVP FVTSATNSDR NMEHFCDTPL KDVVDCQNVP PIYCTPSTIT 360 RHDQEPHQKH TFPTDYSHSA KHEYTPISVE VQNFLHGDMP KIVKQEPLEI ITEVDKHEDL 420 IKQIWEPKFI KEEFLEKSNK IGRDGNDVTN NAIPAHISCI VAKDTPSFLE LPTSLQLSCS 480 RGRRNPEKKR LVFLRDPRKR LWPMLYHEMP NVQVLTSGWE AFCSVNQIEP GDECLFHLED 540 EPERIYQVSI RKCKN

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MGSKVEACMD CTQRCLQLHR KANSLSSVTS FFKVMFGDLF SQALYFPPMF AATVPMLANK  60
KVVLEDSLGQ QWKVTVSDCE GSLAFKKGWS AFSSEHSLEI GDFVIFNHIM DLHFKVSIYT  120
KTGCEKVEFA KRGNMRKRTR STYPVLEKTN EGLKNPQASG TSVGSGSNVA LSQDKCNMTS  180
SQNVNVNRDK RPKYQSHDEC HKPLCKTEIF DDSYNFINQN KDVGLEENRS PLVDLFSMEI  240
PGTENATNKV AVDELNPNCA STLQKATIDV HPVVNAEVLP FPLNISANEI IEKSQCFEEA  300
DRNISGSDND SCHDKTIEVP FVTSATNSDR NMEHFCDTPL KDVVDCQNVP PIYCTPSTIT  360
RHDQEPHQKH TFPTDYSHSA KHEYTPISVE VQNFLHGDMP KIVKQEPLEI ITEVDKHEDL  420
IKQIWEPKFI KEEFLEKSNK IGRDGNDVTN NAIPAHISCI VAKDTPSFLE LPTSLQLSCS  480
RGRRNPEKKR LVFLRDPRKR LWPMLYHEMP NVQVLTSGWE AFCSVNQIEP GDECLFHLED  540
EPERIYQVSI RKCKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	488	500	KKRLVFLRDPRKR
2	489	501	KKRLVFLRDPRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	5e-14	B3 family protein