PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022137058.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 33747 Da PI: 8.564 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.6 | 1.3e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl XP_022137058.1 15 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 62 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.9e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_022137058.1 68 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MMGRPPCCDK VGVKKGPWTP EEDIILVSYI QEHGPGNWRS VPTNTGLLRC SKSCRLRWTN 60 YLRPGIKRGN FTDHEEKMII HLQALLGNRW AAIASYLPQR TDNDIKNYWN THLKKKLKKL 120 QSEGGQDRCT ASSLTKSKGQ WERRLQTDIH TAKRALCEAL SLDKTTSYYD IMGESKTPTN 180 SNLQTPITTA TYASSAENIA RLLENWMKKS PKSSQTTTTQ LSVTASEGSH SATNTTSPEP 240 NLDYHSSFIS FNNTNYSSST PNQVPLTLLE KWLFDDAALA HVPDHDLISV SLEPETEGGL 300 F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 1e-111 | MYB family protein |