PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136945.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 602aa    MW: 66164.1 Da    PI: 5.1792
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136945.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS356.44.3e-1092296002373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++Ll+cA+ +s+++  +a ++L r+s+   +dgdp++Rla+yf eAL++rl+   +   + l +se+ + ns++ l ++k++++++P+ kf+hl
  XP_022136945.1 229 LKVLLDCAR-LSDSEPDRAVKTLDRISKSLREDGDPIERLAFYFEEALRSRLSP--TARKNRLDSSES-DANSEDFLLSYKALNDACPYSKFAHL 319
                     679*****9.6777999************************************9..444444555555.47899********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +e+
  XP_022136945.1 320 TANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRAAGKPtRVRISGIPAPSLGdsPAASLYATGNRLSEFAKLLELNFEFEP-ILTPIEE 413
                     ****************************************77666**********99998999************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++ ++++E+l Vn++lql++llde  +  +   + L+l kslsPk+v++ e ea++n+  F +rf +al++ysa+f+sl+ +lpr+s er 
  XP_022136945.1 414 LNKSSFIIQSDEVLTVNFMLQLYNLLDEVPTGVH---NALRLAKSLSPKIVTLGEYEASLNRIGFYNRFKNALKFYSAIFESLDPNLPRDSPERL 505
                     **************************77666666...9********************************************************* PP

            GRAS 284 kvErellgreivnvvace...gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                      +E+ llgr+i  vv +e   g++rr r+e +e+W++ +e++GF++v+ls++a +qak ll +++ s  y++ e+  +++ l W+d pL++vS+W
  XP_022136945.1 506 QLEKLLLGRRIAGVVGTEeesGSKRRVRMEDKEQWKNLMESSGFESVALSHYAISQAKILLWNYNySSLYTLIESAPEFLsLAWNDVPLLTVSSW 600
                     ***************988223456*****************************************9999*****9999999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MAIAQQVIKQ KQQQEQQQHH QHQHNRHQQQ QHPFSLLPWT SNPSPSMASS SSAPNLTFGI  60
SGSAFSDPFQ VAGPPDSADP AFHFPNLDHP SAGFRFFPNF GGGGEFDSDD WVDSLVGGGD  120
STDSSNLPSA CDAFGVYGAD PFNGSPSRLS VACSPPSEFN RVVLPDSSYK TSSVPQPQRP  180
AWSSPPPPSS PPAVKDVGVV KPPAEWLQKN DAVEGSSSAA ETESPPPLLK VLLDCARLSD  240
SEPDRAVKTL DRISKSLRED GDPIERLAFY FEEALRSRLS PTARKNRLDS SESDANSEDF  300
LLSYKALNDA CPYSKFAHLT ANQAILEATE RASKIHIVDF GIVQGVQWAA LLQALATRAA  360
GKPTRVRISG IPAPSLGDSP AASLYATGNR LSEFAKLLEL NFEFEPILTP IEELNKSSFI  420
IQSDEVLTVN FMLQLYNLLD EVPTGVHNAL RLAKSLSPKI VTLGEYEASL NRIGFYNRFK  480
NALKFYSAIF ESLDPNLPRD SPERLQLEKL LLGRRIAGVV GTEEESGSKR RVRMEDKEQW  540
KNLMESSGFE SVALSHYAIS QAKILLWNYN YSSLYTLIES APEFLSLAWN DVPLLTVSSW  600
HC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein