PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136574.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 283aa MW: 33540.8 Da PI: 8.7951

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64	3.3e-20	18	106	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++e+++ i++r ++e++l + + +kk+lWe s++mrergf r++ qCk+kw+nl ryk +++ k+ +cp+f++++ XP_022136574.1 18 QWSEEETREFIRIRADLERDLTAVStgegpatKKKTLWEMASARMRERGFWRTADQCKCKWKNLLSRYKGKETSHKD----FGWQCPFFEEIH 106 7******************97533445555**********************************9999998....4668***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MLSSMSSSAM AATAQQHQWS EEETREFIRI RADLERDLTA VSTGEGPATK KKTLWEMASA 60 RMRERGFWRT ADQCKCKWKN LLSRYKGKET SHKDFGWQCP FFEEIHAVFA ERGKAMQRLL 120 LEPEAGSMMT KKRARERSLD EGYSDLKEHN EDESEEEMAT QSHSQKKKAI RTLPAKSSRA 180 TDSKSSSSST SNEILEMLKG YFQWQQRMEL EWREILEIHY NKRRLFEQEW RDSMEKLERE 240 RLMAEQAWRE REEERRKRQD IRAEGMDALL KTLLNKLERG NNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	258	REREEERRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	4e-27	Trihelix family protein