PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136052.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 338aa    MW: 37440.5 Da    PI: 6.0378
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH247.1e-08204246855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR+++ ++   L++llP++     kK++ a++Le+A +Y+k Lq
  XP_022136052.1 204 LARQRRQKLSDRTRCLQKLLPWD-----KKMDIATMLEEAYKYVKFLQ 246
                     679*******************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MESSAGDDFS ARVHFPAKTV CEEVWDDACF NAMFSGVSLQ SFLAVNHNHP FLPSLFGGYV  60
ADAISLPDST SLYPPASSNF VSESTASSDA FFKLPKTEPM NNVYETEETE SVFVFHDSTS  120
FPHLPDLRSL EQSSSSSLSP LMSSSFNKRA RVDSGLNPLQ TLEPMVRGCE SFQNFLLPYQ  180
YKPLPDFTTS AAVAPAVQFP RSALARQRRQ KLSDRTRCLQ KLLPWDKKMD IATMLEEAYK  240
YVKFLQAQLL ALQSMPCESA ISTGSNNYNS VSNSGAFGGL ERLNRNQLLQ VLVNSPVAQT  300
MLCSQSFCVF SAEQLGLIQK IAEKRALLQQ MSTFLPKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-20bHLH family protein