PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022135704.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 250aa MW: 28496.3 Da PI: 7.3699 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.9 | 7.3e-16 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +vk++G +W++ ++ g+ R++k+c++rw +yl XP_022135704.1 15 KGIWTAEEDRRLIAYVKRYGHWNWRRLPKFAGLLRCGKSCRLRWMNYL 62 678*****************99**********99************97 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.9e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+e + ++ + Gg+ W+t a+ m+ gRt++++k++w+++l XP_022135704.1 68 RGNFTLQEEETITKLYAAIGGR-WSTMAAQMP-GRTDNDIKNHWNTVL 113 89********************.*********.************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MAKCCCFCDQ TTVKKGIWTA EEDRRLIAYV KRYGHWNWRR LPKFAGLLRC GKSCRLRWMN 60 YLRPNIKRGN FTLQEEETIT KLYAAIGGRW STMAAQMPGR TDNDIKNHWN TVLKRRVMMK 120 QQKMAMEKKP ATEKTGPTHQ VFAGDILNGS NVNNHSTLID QTAVEISALE DLPPAGNMDV 180 AADDQFKSST PELPAGSSPA SSAGDFWTDP LWLDSNLDMP FDEQLSYQGF GESNFFTFGL 240 DEYLWQEGIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28110.1 | 4e-52 | MYB family protein |