PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022135702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 277aa MW: 31750.6 Da PI: 5.8834 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.1 | 4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+l+ +v+++G +W+ +r g+ R++k+c++rw +yl XP_022135702.1 14 KGAWSAEEDEKLKAYVQKHGHCNWRELPRFAGLSRCGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.1 | 1.8e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+el++++++q+G++ W++Ia ++ gRt++++k++w+++l XP_022135702.1 67 RGNYSKDEEELILKLHQQHGNK-WSLIATRLS-GRTDNEIKNYWHTHL 112 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MVRAPFYDEN GVKKGAWSAE EDEKLKAYVQ KHGHCNWREL PRFAGLSRCG KSCRLRWINY 60 LRPDVKRGNY SKDEEELILK LHQQHGNKWS LIATRLSGRT DNEIKNYWHT HLKKLKTSKV 120 TKKQQNEAIP KPKPIQKIES EINKTTFEND IIPSHQIVES SPVLSPLSSE LSSNVFSTQE 180 SAASTIDMAA EENSPAPTTV TSFSFQEPNN DNNADFWAHP FEAAENFLEV ESEDSIYFDS 240 IGGFNSPYDL IFDEDLLIYQ VMKELTQKMT SPNCMIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10280.1 | 6e-53 | MYB family protein |