PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135579.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 546aa    MW: 60780.4 Da    PI: 6.8287
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS348.31.2e-1061755452374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevsPilk 92 
                      +lL++cAeav+ +d ++a+ lL++l+  a   g+++qR+a++f+++La rla  ++  y  +     ++++++++ +++  al+l +e+ P ++
  XP_022135579.1 175 LQLLVACAEAVACRDRAQASILLSQLRASALVFGSSFQRVASCFVQGLADRLALVQPLGYVGFglpiIARADHSSERKKKEEALNLVYEIYPHIQ 269
                     699**************************************************977766654432113445555557777788888********* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     f+h++aN+ Ile +ege+ vH++D+++     +G QW +L+++La+  e+p +lR+Tg+g     s ++++ +ge+L++ Ae +g+++e++v v+
  XP_022135579.1 270 FGHFVANSSILEVFEGENSVHVVDLGMAfglpYGHQWRSLIESLAE-IEPPRRLRVTGIGL----SVNRYRVMGEKLKSQAEGVGIQVEITV-VE 358
                     ************************87762222678**********9.69999*********....9*************************9.79 PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                      +le+l+++++++++gEal++ +++q+h +++es        +vL+++ +lsPk +v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ 
  XP_022135579.1 359 GNLENLRPQDINLHEGEALVIASIFQMHCVVKESRGALT---SVLRMIYELSPKALVLVEQDSNHNGPFFLGRFMEALHYYSAIFDSLDAMLPKY 450
                     9*****************************977665555...8**************************************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     +  r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p   k+++qak  + k+k ++gy+v ee+g+lvlgWk++p+v++S+
  XP_022135579.1 451 DTRRAKIEQFYFAEEIKNIVSCEGMARVERHERVDQWRRRMSRAGFQAAPT--KMMAQAKQWIGKFKaNEGYTVVEEKGCLVLGWKSKPIVAASC 543
                     ************************************************996..6899************************************** PP

            GRAS 373 Wr 374
                     W+
  XP_022135579.1 544 WK 545
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MLPPTYQTTC GKRIASKISP NNAIAVYNTR PLPVFQFQFQ LPSMAPDGEG SISSAAKEEE  60
ELTLSHRRHW LSMLDDTDAS RWVISFSDEI KYHKRSKLEP TDHHDAGGTG SSSLTLSRSG  120
SSDSLTTGLG FRAHIWTYNQ RYLAAEAVEE AAAAIINAEE TAAEDDASAD GMRLLQLLVA  180
CAEAVACRDR AQASILLSQL RASALVFGSS FQRVASCFVQ GLADRLALVQ PLGYVGFGLP  240
IIARADHSSE RKKKEEALNL VYEIYPHIQF GHFVANSSIL EVFEGENSVH VVDLGMAFGL  300
PYGHQWRSLI ESLAEIEPPR RLRVTGIGLS VNRYRVMGEK LKSQAEGVGI QVEITVVEGN  360
LENLRPQDIN LHEGEALVIA SIFQMHCVVK ESRGALTSVL RMIYELSPKA LVLVEQDSNH  420
NGPFFLGRFM EALHYYSAIF DSLDAMLPKY DTRRAKIEQF YFAEEIKNIV SCEGMARVER  480
HERVDQWRRR MSRAGFQAAP TKMMAQAKQW IGKFKANEGY TVVEEKGCLV LGWKSKPIVA  540
ASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-72GRAS family protein