PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135374.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 337aa    MW: 38954.8 Da    PI: 7.9438
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.13.5e-49271651128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     + pGfrFhPtdeelv +yL++kve+k++++ e+ik++diyk++PwdLp+  + +ekewyfFs r +ky++++r+nr+t sg+Wkatg dk+++s+
  XP_022135374.1  27 MLPGFRFHPTDEELVGFYLRQKVEKKPISI-EIIKQIDIYKYDPWDLPRVSNVGEKEWYFFSIRGRKYRNSTRPNRVTGSGFWKATGIDKPIFST 120
                     579***************************.99***************8778899***************************************8 PP

             NAM  96 ....kgel..........vglkktLvfykgrapkgektdWvmheyrl 128
                         +             +glkk+Lv+y+g+a k++ktdW+mhe+rl
  XP_022135374.1 121 himkS--SpnyqerpsciIGLKKSLVYYRGSAGKATKTDWMMHEFRL 165
                     66540..14566677888***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MEVTTTKLVD VAASSECCEE EEEEEVMLPG FRFHPTDEEL VGFYLRQKVE KKPISIEIIK  60
QIDIYKYDPW DLPRVSNVGE KEWYFFSIRG RKYRNSTRPN RVTGSGFWKA TGIDKPIFST  120
HIMKSSPNYQ ERPSCIIGLK KSLVYYRGSA GKATKTDWMM HEFRLPFNTN NNSSQPSLHH  180
HHSYILPQDA EVWTLCRIFR RVPSFRKYTP STNNPKNQNN IIINNPIPIS DLTLQNPNYH  240
SNTIFTSKSN TTSPFSTPLH HETKPNPNSQ QLNIFNPNLP LSHAIFLEPS SSYPSSFRND  300
VDGKEGRDDI FTNRGWDELR PVVQFAVDPS SQLYDCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-82NAC family protein