PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022135206.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 28728.9 Da PI: 8.5712 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 104 | 2e-32 | 13 | 172 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikev.diykvePwdLpk.kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrF+Pt++elv eyLk k+ +++ + ++++i+e+ d+++++Pwd+p +++e+e+ y Fsk+++ + + +r+t sgyWk tg+d XP_022135206.1 13 LPPGFRFEPTEQELVFEYLKCKLLSSSsslNLCASIIPEIlDVCNFDPWDIPVpGGDGNEEEMrYLFSKNRNGNGN---GKRSTPSGYWKPTGRD 104 79********************9999856422345799999**********9533333444545999999887665...567899********** PP NAM 90 kevlsk..........kgel..............vglkktLvfy.......kgrapkgektdWvmheyrl 128 ++++++ + + vg+kktLvf+ k ++ + ++++Wvmhey+l XP_022135206.1 105 TKIVASsspsnsnwssN--KnnnsyssssssstsVGIKKTLVFFstskakgKTKRMRRTRSRWVMHEYSL 172 ****9877766665541..156677777788888**********666553323444445899******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDKLVRFDGI RGLPPGFRFE PTEQELVFEY LKCKLLSSSS SLNLCASIIP EILDVCNFDP 60 WDIPVPGGDG NEEEMRYLFS KNRNGNGNGK RSTPSGYWKP TGRDTKIVAS SSPSNSNWSS 120 NKNNNSYSSS SSSSTSVGIK KTLVFFSTSK AKGKTKRMRR TRSRWVMHEY SLFLPTQTQM 180 DHTENNWVVC RIFCSNNNNT TTTNYESDFM MMDPNHMDME EIDDMHYGRR RPCTSTTVSS 240 SSSSSSSSSY NPHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 6e-28 | NAC family protein |