PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134696.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 302aa    MW: 32752.7 Da    PI: 8.1925
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.57.4e-09759347
                     SS-HHHHHHHHHHHHHTTTT.........-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.........tWktIartmgkgRtlkqcksrwqky 47
                     +WT+eEd+ + +a++++  +          W++Ia++++  +  + +k ++q++
   XP_022134696.1  7 AWTKEEDKAFENAIAMHWAEelegkdsegMWEKIASMVP-SKDMEALKQHFQML 59
                     7*****************99*******************.************86 PP
2Myb_DNA-binding38.92e-12138182347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_022134696.1 138 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 182
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MSTGSAAWTK EEDKAFENAI AMHWAEELEG KDSEGMWEKI ASMVPSKDME ALKQHFQMLV  60
EDVGAIEAGQ IPIPNYASVG GATNGSTKEK EHLHPHGATG TDSNNKRPNS GFGSGFSGLS  120
HDSKGGSRSE QERRKGIPWT EEEHRLFLLG LDKFGKGDWR SISRNFVISR TPTQVASHAQ  180
KYFIRLNSMN RDRRRSSIHD ITSVNNGSGD VMTHQAPITG HQTNGTNQGN PPALGPPGKH  240
RPQQHLPGIG MYGAPIGHPV AAPPGHMASA VGTPVMLPHG MHPHPPYVMP VAYPMAPPPM  300
HQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-78MYB family protein