PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134251.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 440aa MW: 50571.1 Da PI: 6.6193

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.4	2.6e-25	115	212	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a++++++++ ++ +kk++W+ +sk+m+erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d XP_022134251.1 115 KWTDKMVKLLITAVSYIGDDIASDHdgggrrkfqiiQKKGKWKLISKVMAERGYQVSPQQCEDKFNDLNKRYKRLNDIIGRGtSCQVVENPALLD 209 7************999999987667778889999********************************************6699999998888 PP trihelix 84 qle 86 l+ XP_022134251.1 210 VLD 212 775 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MEGNLSQGGL IPGGSSYGGL DLQGSFKVHN QALHHHPHSH TRQGSSANPS IQEGFSLSMA 60 ALQNCDHTMS MVDYNKGERF KNSPSDDEPS FTEDGVDGHN ETSKGKKGSL WHRVKWTDKM 120 VKLLITAVSY IGDDIASDHD GGGRRKFQII QKKGKWKLIS KVMAERGYQV SPQQCEDKFN 180 DLNKRYKRLN DIIGRGTSCQ VVENPALLDV LDYLTDKDKD DVRKILNSKQ LFYEEMCSYH 240 NSNRLHLPHD PALQRSLQLA FRARDDHDND EPRRHQNDDF DENEHGETDE HDDFEENFAP 300 HGDNRRLFGA GSAKRLRRGQ DHDEAHACGN SLTSHDCNKS SHTYSQFTPA DTAQLETESM 360 KASTSQKQWM ELRLLQMEDQ KLQIQVEMLE LEKQRFKWER FNKKKDCELE KMRMVNERMK 420 LENERIALDL KQKEIGSGFH

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MEGNLSQGGL IPGGSSYGGL DLQGSFKVHN QALHHHPHSH TRQGSSANPS IQEGFSLSMA  60
ALQNCDHTMS MVDYNKGERF KNSPSDDEPS FTEDGVDGHN ETSKGKKGSL WHRVKWTDKM  120
VKLLITAVSY IGDDIASDHD GGGRRKFQII QKKGKWKLIS KVMAERGYQV SPQQCEDKFN  180
DLNKRYKRLN DIIGRGTSCQ VVENPALLDV LDYLTDKDKD DVRKILNSKQ LFYEEMCSYH  240
NSNRLHLPHD PALQRSLQLA FRARDDHDND EPRRHQNDDF DENEHGETDE HDDFEENFAP  300
HGDNRRLFGA GSAKRLRRGQ DHDEAHACGN SLTSHDCNKS SHTYSQFTPA DTAQLETESM  360
KASTSQKQWM ELRLLQMEDQ KLQIQVEMLE LEKQRFKWER FNKKKDCELE KMRMVNERMK  420
LENERIALDL KQKEIGSGFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-163	Trihelix family protein