PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134100.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 439aa MW: 48967.5 Da PI: 6.5532

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.7e-17	232	278	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed llv++v q+G + W+ Ia+++ gR +kqc++rw+++l XP_022134100.1 232 KGQWTPQEDRLLVQLVDQYGIKKWSQIAKMLE-GRVGKQCRERWHNHL 278 799***************************.***********97 PP
2	Myb_DNA-binding	54.3	3.1e-17	284	326	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eEd +l++a+k G++ W+ Iar+++ gRt++ +k++w+ XP_022134100.1 284 KDAWSEEEDRILIEAHKDIGNK-WAEIARRLP-GRTENTIKNHWN 326 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MEFDSNFKDD LPLLSSFFSD KTDSKLKLDI DVDSGGGDDG GEFLGMELPS SSSSKGLFHS 60 LQVHHYDHHH QNHQYLHHFP INGSDSINPQ HHNFSIDGSL QSLISGMNMP ASSQSCNFDP 120 NFQPNFLGNE FSKDHTFENG AKFMHGLLGS GAVWTNFPGN FLPQISQLPN SNNNNSIIHQ 180 AALGSASMFL DHEASCITAD SSGFNDQNKK KKRVLQIRKE NKPPKKLPNI IKGQWTPQED 240 RLLVQLVDQY GIKKWSQIAK MLEGRVGKQC RERWHNHLRP DIRKDAWSEE EDRILIEAHK 300 DIGNKWAEIA RRLPGRTENT IKNHWNATKR RQNSKKLKGK LDNSDDSAAS TASILQNYIK 360 TVTAAAVGDR QQISDSLPQL VDSTPAAADG FCFGFGFGSG SGSGSESNMD LEMESLNLMQ 420 SDQMKSEMDL LDLICQGNL

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MEFDSNFKDD LPLLSSFFSD KTDSKLKLDI DVDSGGGDDG GEFLGMELPS SSSSKGLFHS  60
LQVHHYDHHH QNHQYLHHFP INGSDSINPQ HHNFSIDGSL QSLISGMNMP ASSQSCNFDP  120
NFQPNFLGNE FSKDHTFENG AKFMHGLLGS GAVWTNFPGN FLPQISQLPN SNNNNSIIHQ  180
AALGSASMFL DHEASCITAD SSGFNDQNKK KKRVLQIRKE NKPPKKLPNI IKGQWTPQED  240
RLLVQLVDQY GIKKWSQIAK MLEGRVGKQC RERWHNHLRP DIRKDAWSEE EDRILIEAHK  300
DIGNKWAEIA RRLPGRTENT IKNHWNATKR RQNSKKLKGK LDNSDDSAAS TASILQNYIK  360
TVTAAAVGDR QQISDSLPQL VDSTPAAADG FCFGFGFGSG SGSGSESNMD LEMESLNLMQ  420
SDQMKSEMDL LDLICQGNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	2e-65	MYB family protein