PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134023.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 559aa MW: 62318.8 Da PI: 4.2949

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yL++kv+gk++++ e i+ +diyk+ePwdLp+ k+k+++ ewyfFs+ dkky +++r+nrat++gyWk+tgkd++v XP_022134023.1 9 LAPGFRFHPTDEELVRYYLRRKVSGKSVRF-EPISVTDIYKSEPWDLPEksKLKTRDLEWYFFSPLDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579**********************999.89**********95246777777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_022134023.1 103 H-NSRVVGMKKTLVYHSGRAPRGDRSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MGRGSAASLA PGFRFHPTDE ELVRYYLRRK VSGKSVRFEP ISVTDIYKSE PWDLPEKSKL 60 KTRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR 120 APRGDRSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE 180 DDEELIVMPG EEVVANEGLV DDDIHFGVDD IAQQYLDEGL PFEYAQLPSN YPEDTSNHVD 240 LPDVLVESDT KPEVCVGDTL ELQHNHGFFQ LPEQCGMGGN AESSDNFAES SDNYKHEDVD 300 YLLDEPYPSV PDDLALNEEL FLEANDLSNP VETDPIGFDV LEEYLTFFDA DDDNLQLSFD 360 PSEILGSEDP ISGQAIPEEK ANGVAENEFV AIKQTSVASG NDASTSKQKP EATTETGLDS 420 RSSFLKRASY LLGDIPAPPA FASEYPSKDT AIQQNSAAPT SSSVHLTAGM IQIRSLTSSE 480 DLANSLALYR KYAEVNQTHF LGGLQGVNDD IIRQTPIFVA VSQKNGNTGS RGSFLFFFLL 540 FWVLILSVSY KVGSCIYSH

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MGRGSAASLA PGFRFHPTDE ELVRYYLRRK VSGKSVRFEP ISVTDIYKSE PWDLPEKSKL  60
KTRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGDRSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE  180
DDEELIVMPG EEVVANEGLV DDDIHFGVDD IAQQYLDEGL PFEYAQLPSN YPEDTSNHVD  240
LPDVLVESDT KPEVCVGDTL ELQHNHGFFQ LPEQCGMGGN AESSDNFAES SDNYKHEDVD  300
YLLDEPYPSV PDDLALNEEL FLEANDLSNP VETDPIGFDV LEEYLTFFDA DDDNLQLSFD  360
PSEILGSEDP ISGQAIPEEK ANGVAENEFV AIKQTSVASG NDASTSKQKP EATTETGLDS  420
RSSFLKRASY LLGDIPAPPA FASEYPSKDT AIQQNSAAPT SSSVHLTAGM IQIRSLTSSE  480
DLANSLALYR KYAEVNQTHF LGGLQGVNDD IIRQTPIFVA VSQKNGNTGS RGSFLFFFLL  540
FWVLILSVSY KVGSCIYSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-129	NAC family protein