PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022133787.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 209aa MW: 24018.9 Da PI: 6.0306 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5.3e-18 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l ++++ +G g W++ a+ g++Rt+k+c++rw++yl XP_022133787.1 17 KGPWTTEEDLILMNYIAIHGEGVWNSLAKAAGLKRTGKSCRLRWLNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.8e-17 | 70 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ d++ ++G++ W++Iar+++ gRt++++k++w++ XP_022133787.1 70 RGNITAEEQLLIMDLHSKWGNR-WSKIARHLP-GRTDNEIKNYWRT 113 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGTERLSSSQ DEDEVRKGPW TTEEDLILMN YIAIHGEGVW NSLAKAAGLK RTGKSCRLRW 60 LNYLRPDVRR GNITAEEQLL IMDLHSKWGN RWSKIARHLP GRTDNEIKNY WRTRIQKHIK 120 QQEVKSVGEQ MMSVGSCSDT NDDRTISPSS QVSSFGNVAE LMDIGHGYFP SCQGDMEGMA 180 YQQTTWPRGD GENDNYWSME DLWSMQLLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 2e-77 | MYB family protein |