PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133713.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 570aa MW: 64358.5 Da PI: 4.4394

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.6	3e-50	17	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLk k+ ++kl+l ++i+++d+yk+eP++Lp + k+k+++++w+fFs+r+++y++ +r +rat+sgyWkatgkd+ + + XP_022133713.1 17 PPGFRFHPTDEELVLYYLKFKICRRKLKL-DIIRDTDVYKWEPEELPgQsKLKTGDRQWFFFSPRERRYPNATRLSRATRSGYWKATGKDRIIRC 110 8**************************.99**********963589999***********************************9 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+grap+g +tdWvmhey+l XP_022133713.1 111 -NSRNVGVKKTLVFYEGRAPNGDRTDWVMHEYTL 143 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MSTVSSGMGF CDEGDWPPGF RFHPTDEELV LYYLKFKICR RKLKLDIIRD TDVYKWEPEE 60 LPGQSKLKTG DRQWFFFSPR ERRYPNATRL SRATRSGYWK ATGKDRIIRC NSRNVGVKKT 120 LVFYEGRAPN GDRTDWVMHE YTLDEDELKR CKNVKDYYAL YKLYKKSGPG PKNGEQYGAP 180 FREEDWADDL CQGFNVSDVQ EPQVNITDEV TSVAHQKENG QALLSSDDIE EFMKQIANDP 240 VLELPSVNDY CQFDSDLQVD EEEETVSTMI NVYSRDCVAP EADKFHLSGR PSDLHGNFEF 300 TQSGISQLQS FEGEVSSAPR YSGASNILQE EDFLEIDDLI DPEPTSMSNN HPLENVPPSQ 360 LDGLSELDLF HDADMFLRDL GPIIPETVLD PYLNADDITL VNNLNGHLQS GPYVENQMEN 420 LFWKNNETEN AFGFPELRQQ FDTEPTLGVG CESVSSAAAA AGTSENQRAN EGGSSASWFS 480 SNLWAFVESI PTTPASASEN VNRAFERMSS FSRLRLNTLN TNVAVRNPGT GARRTGMNKG 540 FFFFSILGVL CAILWVLIGN VRLWGRCIAS

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MSTVSSGMGF CDEGDWPPGF RFHPTDEELV LYYLKFKICR RKLKLDIIRD TDVYKWEPEE  60
LPGQSKLKTG DRQWFFFSPR ERRYPNATRL SRATRSGYWK ATGKDRIIRC NSRNVGVKKT  120
LVFYEGRAPN GDRTDWVMHE YTLDEDELKR CKNVKDYYAL YKLYKKSGPG PKNGEQYGAP  180
FREEDWADDL CQGFNVSDVQ EPQVNITDEV TSVAHQKENG QALLSSDDIE EFMKQIANDP  240
VLELPSVNDY CQFDSDLQVD EEEETVSTMI NVYSRDCVAP EADKFHLSGR PSDLHGNFEF  300
TQSGISQLQS FEGEVSSAPR YSGASNILQE EDFLEIDDLI DPEPTSMSNN HPLENVPPSQ  360
LDGLSELDLF HDADMFLRDL GPIIPETVLD PYLNADDITL VNNLNGHLQS GPYVENQMEN  420
LFWKNNETEN AFGFPELRQQ FDTEPTLGVG CESVSSAAAA AGTSENQRAN EGGSSASWFS  480
SNLWAFVESI PTTPASASEN VNRAFERMSS FSRLRLNTLN TNVAVRNPGT GARRTGMNKG  540
FFFFSILGVL CAILWVLIGN VRLWGRCIAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-123	NAC family protein