PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133632.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 276aa    MW: 31425.1 Da    PI: 7.3921
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133632.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  lv +++q+G+g+W++++   g+ R+ k+c++rw +yl
   XP_022133632.1 14 KGPWTPEEDIVLVSYIQQHGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding48.22.5e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T +E+  ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022133632.1  67 RGNFTHQEENMIIHLQALLGNR-WAAIASYLP-QRTDNDVKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MGRPPCCDKE GVKKGPWTPE EDIVLVSYIQ QHGPGNWRAV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF THQEENMIIH LQALLGNRWA AIASYLPQRT DNDVKNYWNT HLKKKLRKQL  120
QTNNSNSGGE MGRGQWEKRL QTDIRMARQA LWEALTPQNS TPPNFSDSET ITNPFPFHYS  180
SKCTTSYASS TENIARLLTG WMNKNPPNNP PTCPNTSDES EAFGSFFRFE SFESENSSDC  240
DQPETKLSVL EKWLLEEGGV QGIRSDSLPE NEDLIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74650.11e-96MYB family protein