PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133511.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ERF

Protein Properties

Length: 412aa MW: 43942.9 Da PI: 6.125

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.8	1.8e-20	203	252	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g XP_022133511.1 203 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 252 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MCSFKVANQA GGGDGDGGDG GDHHRLLHGQ NDDDYYSGGS YVGKFGEVSA MVSALTDVVS 60 GQGAADWGYG GGQGFPVGFV SSSSSSSSAS ASASSPLSAY SSSSEASYVS ALSSCSGYWA 120 GQKRMRDHEE IGQTQSDFES FSRVYRGFVD DHFAESQGQS SSGVKEEVQM PYTAASIPAA 180 AAVVASPMSS NEANLAAGER RRRYRGVRQR PWGKWAAEIR DPHKAARVWL GTFDTAEAAA 240 RAYDEAALRF RGNRAKLNFP ENVRLIPPQH HIPATASSVF PGSSASHFAP PLPPPSFQPQ 300 LSPFQTQHFR DYLEYSNLIQ SSGEVLGQPS SLLQQMFYNA QLAPFQSPQL APSPSPSPSP 360 SVSNSVFLAP PHQQQQMGFF RPPQNQSQGD SDYFPAISWK DSGGQDPPSS SG

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MCSFKVANQA GGGDGDGGDG GDHHRLLHGQ NDDDYYSGGS YVGKFGEVSA MVSALTDVVS  60
GQGAADWGYG GGQGFPVGFV SSSSSSSSAS ASASSPLSAY SSSSEASYVS ALSSCSGYWA  120
GQKRMRDHEE IGQTQSDFES FSRVYRGFVD DHFAESQGQS SSGVKEEVQM PYTAASIPAA  180
AAVVASPMSS NEANLAAGER RRRYRGVRQR PWGKWAAEIR DPHKAARVWL GTFDTAEAAA  240
RAYDEAALRF RGNRAKLNFP ENVRLIPPQH HIPATASSVF PGSSASHFAP PLPPPSFQPQ  300
LSPFQTQHFR DYLEYSNLIQ SSGEVLGQPS SLLQQMFYNA QLAPFQSPQL APSPSPSPSP  360
SVSNSVFLAP PHQQQQMGFF RPPQNQSQGD SDYFPAISWK DSGGQDPPSS SG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	199	204	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64750.1	4e-16	ERF family protein