PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133098.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 316aa MW: 35355.7 Da PI: 7.0859

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.8e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_022133098.1 14 KGPWSPEEDAKLKAYIEQYGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.7	4.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022133098.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QYGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIRHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QQKEQQALAR RFHTIKQETL KRSDGDKNFN IVAVPEVSMM NQQTPYFAVP NSSGQDLRDL 180 VMKMVNPVEI SQTTTQDPLF FESSNFVQFS SENMQFGVNN FHQDPSAAMF HGGGEFGDPL 240 QNLDGLVEDF YGMENNNNNN MMGGGSVGSS SVESTSLGEM SSLVYPLVSS SDFEPSLAQN 300 NNVAAFAQSR HHYCLQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	143	ETLKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-78	MYB family protein