PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022132692.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 249aa MW: 27307.9 Da PI: 8.1162 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.8 | 3.8e-18 | 124 | 178 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q Lee F+ +++++ ++++ LA++l+L rqV vWFqNrRa+ k XP_022132692.1 124 RKKLRLTKQQSALLEESFKLHSTLNPKQKQALARELNLRPRQVEVWFQNRRARTK 178 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 123.8 | 8e-40 | 124 | 213 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k+q++lLEesF+ +++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke +eL+ +l XP_022132692.1 124 RKKLRLTKQQSALLEESFKLHSTLNPKQKQALARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTDENRRLQKELQELK-AL 213 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MGFDDLSNTG LLLGLGLTLP SKPSPPDNLS QTPKKSVALF TFSPSAANSE PSLTLGLSSD 60 AYLNLQAAAD AVDLCRQPSP HSAVSSFSSG GRVKRERDVS GEDIEEEKAS SRVSDEDEDG 120 SNARKKLRLT KQQSALLEES FKLHSTLNPK QKQALARELN LRPRQVEVWF QNRRARTKLK 180 QTEVDCEFLK RCCETLTDEN RRLQKELQEL KALKLAQPLF MQMPAATLTM CPSCERIGGG 240 VNGDGSSKG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 181 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 2e-77 | HD-ZIP family protein |