PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132279.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 281aa MW: 30946.6 Da PI: 9.4149

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.4	7.7e-19	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + XP_022132279.1 12 KGPWSPEEDESLRRLVESYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	54.3	3.1e-17	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ + +a++++G++ W+tIar ++ gRt++ +k++w++ XP_022132279.1 66 PFTPEEDDAISRAHAKFGNK-WATIARLLN-GRTDNAIKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MDSVRKDAER IKGPWSPEED ESLRRLVESY GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 QVEHRPFTPE EDDAISRAHA KFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSAMAEDF 120 NDADTHQPLK RSASVATPSV ASGFAFNPSS PSGSDLSDSS PSPPHVYRPL ARSGSVVPSN 180 HQSDDPATSL SLSLPGIGSS SSSGYGSDSV ASPTRTMVQV QAPPAWYEKE LFSADFLAAM 240 QEMIKMEVRK YMSGIEHNGW RFQTDAIRNA VVKRIGISKI D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	3e-75	MYB family protein