PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131785.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CPP

Protein Properties

Length: 783aa MW: 86694.8 Da PI: 5.4376

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	52.4	1e-16	422	462	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCkkskClk+YC+Cfaag +C e+C+Ce+C+N+ e+ XP_022131785.1 422 DSKRCNCKKSKCLKLYCDCFAAGIYCPESCSCEGCFNNPEN 462 689**********************************9875 PP
2	TCR	48.4	1.9e-15	496	535	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++kkgC+Ckks Clk+YCeC++a++ C+ +C+CedC+N + XP_022131785.1 496 RHKKGCSCKKSMCLKQYCECYQANVGCTIRCRCEDCRNIH 535 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
MDSPKTTQLT STLTNLSAIA TIAISPSDSP PDSFSDFVDH LFPIEPSKCD SEVQGLDSFV 60 FSSPHLNVNV ESSLLKRTRS SNTELAAESQ EANNKISEQT ELCPFDNFLA DFEEVAGSSI 120 IQVLCEKAEQ NFEENFAPEV CRPLEIENEQ SSIAFYCTES DLSTSQAFRK QENEDLCAQM 180 QDTCTIYQDG LDFMPQYLQE RLSNANLHGA YECDTQETLD GAFQPLSISQ PQSSMCQRYL 240 QSKEATANAT QKNLLSSNFT SNVKATSQHP SSVEDIELSV SNLDSALNTR VPAKSLHSLH 300 TLPHPDSGGN PPLGISRPSG IGLHLNSVIS VAMKNHGLKN DTTCSRDVSS STEDMEGHES 360 KSISSTSSIT LQSCHAVKFE NFETPCETRN FDYDPSFNLE KINNLPHKRK RKKSSVSSSG 420 DDSKRCNCKK SKCLKLYCDC FAAGIYCPES CSCEGCFNNP ENEQTVVEIR HQIESRDPLA 480 FAPKENGRPL NPSLARHKKG CSCKKSMCLK QYCECYQANV GCTIRCRCED CRNIHGKKEE 540 PCATPPEVAC DRADVGISEA KLINDRDTAA FRKDISHSEF YDQQHNLASQ TPFQYLDHEN 600 DSSKSRLVSR RCLPSPEFDA TSSSSPSCTD LFVETKTNIF DVGSYQWQHM NCDNGGASST 660 SSIQSKPRGW INVSRIGQLG TRGSSMSWLS SPDTLSIQAS ETPIKYINEN SPKNQTLSLH 720 RGSENEVGKE NSSSWLKGRR YILKSMPHSP PLTAHNKYRA TDNSSGSDCN DINSKVIKXE 780 CPW

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

MDSPKTTQLT STLTNLSAIA TIAISPSDSP PDSFSDFVDH LFPIEPSKCD SEVQGLDSFV  60
FSSPHLNVNV ESSLLKRTRS SNTELAAESQ EANNKISEQT ELCPFDNFLA DFEEVAGSSI  120
IQVLCEKAEQ NFEENFAPEV CRPLEIENEQ SSIAFYCTES DLSTSQAFRK QENEDLCAQM  180
QDTCTIYQDG LDFMPQYLQE RLSNANLHGA YECDTQETLD GAFQPLSISQ PQSSMCQRYL  240
QSKEATANAT QKNLLSSNFT SNVKATSQHP SSVEDIELSV SNLDSALNTR VPAKSLHSLH  300
TLPHPDSGGN PPLGISRPSG IGLHLNSVIS VAMKNHGLKN DTTCSRDVSS STEDMEGHES  360
KSISSTSSIT LQSCHAVKFE NFETPCETRN FDYDPSFNLE KINNLPHKRK RKKSSVSSSG  420
DDSKRCNCKK SKCLKLYCDC FAAGIYCPES CSCEGCFNNP ENEQTVVEIR HQIESRDPLA  480
FAPKENGRPL NPSLARHKKG CSCKKSMCLK QYCECYQANV GCTIRCRCED CRNIHGKKEE  540
PCATPPEVAC DRADVGISEA KLINDRDTAA FRKDISHSEF YDQQHNLASQ TPFQYLDHEN  600
DSSKSRLVSR RCLPSPEFDA TSSSSPSCTD LFVETKTNIF DVGSYQWQHM NCDNGGASST  660
SSIQSKPRGW INVSRIGQLG TRGSSMSWLS SPDTLSIQAS ETPIKYINEN SPKNQTLSLH  720
RGSENEVGKE NSSSWLKGRR YILKSMPHSP PLTAHNKYRA TDNSSGSDCN DINSKVIKXE  780
CPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	409	413	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	3e-44	CPP family protein