PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW21915 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 25165.8 Da PI: 9.6532 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.3 | 2.7e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s OIW21915 9 KFIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 87.3 | 3e-29 | 81 | 170 | 8 | 97 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + e+++++l+qe++ + ++i+ L+ ++R+llGe+L+s+s+ eLq++e+qLe+s+ ++R++K+++++eqi++l++kek l en +L+ k OIW21915 81 RSVEQNMQHLKQEASSMMEKIDLLEASKRKLLGEGLGSCSIDELQEIEKQLERSVGNVRARKTQVFKEQIQQLKEKEKTLVAENCRLSLK 170 467899*******************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MVRGKTQMKF IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIVFSP RGKLYEFASS 60 SMQETIERYR RHARDTPTTP RSVEQNMQHL KQEASSMMEK IDLLEASKRK LLGEGLGSCS 120 IDELQEIEKQ LERSVGNVRA RKTQVFKEQI QQLKEKEKTL VAENCRLSLK YGICPQPATK 180 DQREKQPEPY AESSSPSNSD VETELFIGLP ETRPRRISPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 4e-87 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW21915 |