PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW21250 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB_related | ||||||||
Protein Properties | Length: 178aa MW: 20646.3 Da PI: 5.6046 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.2e-17 | 9 | 56 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqk 46 +g+W++eEd ll +v+q+G + W++++++ g gRt++++k++w+ OIW21250 9 KGAWSKEEDNLLRACVQQYGEEKWHLVPKRAGrlPGRTANDVKNYWNA 56 79********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MEGSSGVRKG AWSKEEDNLL RACVQQYGEE KWHLVPKRAG RLPGRTANDV KNYWNAHIHK 60 KISSQNEDIS AIPMKIVMEP HLVIKPQPRK FSTKMPLLRH SENQSGFKQC ITNQACLATT 120 SECNNENDMC WLGEQDWMLL KDLNWDEDLN SLTTKFDDIV EIDQCWSDVH FDINLWES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56650.1 | 1e-24 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW21250 |