PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW21148 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 192aa MW: 21817.5 Da PI: 8.2826 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48 | 2.8e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l d+++++G +W+t ++ g+ R++ +c+ rw +yl OIW21148 14 KGAWSQQEDQKLRDYIQKHGEVCWSTLPQAAGLLRCGTSCRQRWTNYL 61 79******************99**********99************97 PP | |||||||
2 | Myb_DNA-binding | 53 | 8e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ OIW21148 67 RGNFGEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 111 89********************.*********.***********987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 192 aa Download sequence |
MRKPNCRDVK GMNKGAWSQQ EDQKLRDYIQ KHGEVCWSTL PQAAGLLRCG TSCRQRWTNY 60 LRPDVKRGNF GEDEEDLIIK LHALLGNRWS LIAGRLPGRT DNEVKNYWNS HIRRKLISNG 120 IDPNNHRLSQ NVLPLQNPSI CGSSKSSSLE DNNCKNKSIK PQVEHYGQDS DAASCEEVES 180 YALPDLNLDL SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G09460.1 | 7e-69 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW21148 |