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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW20975 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 303aa MW: 33901 Da PI: 8.4094 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 56.6 | 6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+l++++k +G g+W++ ++ g+ R++k+c++rw +yl
OIW20975 14 KGAWTKEEDERLINYIKIHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
79******************************99************97 PP
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| 2 | Myb_DNA-binding | 60.4 | 3.8e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++T+eEdel+++++ +lG++ W++Ia++++ gRt++++k++w+++
OIW20975 67 RGNFTEEEDELIINLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 111
89********************.*********.************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 303 aa Download sequence |
MGRSPCCEKE HTNKGAWTKE EDERLINYIK IHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIN LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIKRKLYSRG 120 IDPQTHRPLN AAAAATTTTT ARPANTIITT TSNKKMNKDN ISNINQDINN NNFQLVNGTE 180 DSNSSSGVTT DELAFHPHNQ LNLDLSIGLP SNHPIAPSSS TMNPENSNKK LKQEPQVLYQ 240 WYNGINNVAT SQKEGVCLCY GLGFQSNNQG CSCKAMETGT TTVTATTATD NHDLYRFCPP 300 MSF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G38620.1 | 4e-86 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW20975 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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