PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20605

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 425aa MW: 46786 Da PI: 6.5812

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20605	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.6e-17	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ OIW20605 59 REKWTEEEHQKFLEALKLYGRG-WRQIEEHIG-TKTAVQIRSHAQKF 103 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MDMQDQIEGS KSNNSRSGSS SHSNGATKSE NVSQSRDVTS AGNNHTPKVR KPYTISKQRE 60 KWTEEEHQKF LEALKLYGRG WRQIEEHIGT KTAVQIRSHA QKFFSKIVRE SDGNAETSKQ 120 PIDIPPPRPK RKPLHPYPRK SVNSSKEHFI PSESGISPPS NLLIAEKVTQ SPTSVLSAFG 180 SDAFEQSFLD QTNRCVSPNS CTTDIHPLSL SPVDKENECM ISNSSEEEAK GSLASVPLST 240 SSKLLLSVKS ELSSKETECL KEESAEMPRV TCIKLFGRTV SMVGNQKSMN VDEEENNKSI 300 TSNSDEVGNV EYQNLCGAWL SEQVDIHLSL GLCNSNCHTN PDGVKVTGEE GSSCTGSNAE 360 SVSGMENQCK ILDAVDSQYQ KSRHVEGKVS QRGFVPYKRC LAERDANSLV ASLEEREGQR 420 ARVCL

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MDMQDQIEGS KSNNSRSGSS SHSNGATKSE NVSQSRDVTS AGNNHTPKVR KPYTISKQRE  60
KWTEEEHQKF LEALKLYGRG WRQIEEHIGT KTAVQIRSHA QKFFSKIVRE SDGNAETSKQ  120
PIDIPPPRPK RKPLHPYPRK SVNSSKEHFI PSESGISPPS NLLIAEKVTQ SPTSVLSAFG  180
SDAFEQSFLD QTNRCVSPNS CTTDIHPLSL SPVDKENECM ISNSSEEEAK GSLASVPLST  240
SSKLLLSVKS ELSSKETECL KEESAEMPRV TCIKLFGRTV SMVGNQKSMN VDEEENNKSI  300
TSNSDEVGNV EYQNLCGAWL SEQVDIHLSL GLCNSNCHTN PDGVKVTGEE GSSCTGSNAE  360
SVSGMENQCK ILDAVDSQYQ KSRHVEGKVS QRGFVPYKRC LAERDANSLV ASLEEREGQR  420
ARVCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	9e-67	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIW20605