PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20268

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 362aa MW: 40810.1 Da PI: 4.3113

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20268	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4e-10	10	44	17	48
HHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 17 kqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 +ql ++ +W++Ia++++ gRt++++k++w+++l OIW20268 10 HQLKMKlkcsSWSLIASHLP-GRTDNEIKNYWNSHL 44 55555566669*******.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MNETVHILLH QLKMKLKCSS WSLIASHLPG RTDNEIKNYW NSHLSRKIYT ATTTTTATIT 60 TATTTTVPRI MDIPPKRRNG RTNRWAMKKN KIYALKTKLN NHQESPKQSY QSVVTHKNHE 120 AVPLAPTPSL EFDNFTMVMD FMVFGEEIGD GPSKGSSKQE DENERGTVVD EKYCLMEEDA 180 IINNMLCING EKEKSDPENS VQYQEFINDG WGLNFNEIMD TCFMEEPSGL LSLTFGEEIE 240 NNNNNNNINI NDLVPNGAAK NEQTCTTHIE NNSVNQSSNG ESGELLCSSS SMVTGLDDSN 300 NNSNWDWGSA IQLNGNDDLS ESLEKKENLL TWLLEDDDWG MDYNQLGDID SEVDLMLAWL 360 SS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MNETVHILLH QLKMKLKCSS WSLIASHLPG RTDNEIKNYW NSHLSRKIYT ATTTTTATIT  60
TATTTTVPRI MDIPPKRRNG RTNRWAMKKN KIYALKTKLN NHQESPKQSY QSVVTHKNHE  120
AVPLAPTPSL EFDNFTMVMD FMVFGEEIGD GPSKGSSKQE DENERGTVVD EKYCLMEEDA  180
IINNMLCING EKEKSDPENS VQYQEFINDG WGLNFNEIMD TCFMEEPSGL LSLTFGEEIE  240
NNNNNNNINI NDLVPNGAAK NEQTCTTHIE NNSVNQSSNG ESGELLCSSS SMVTGLDDSN  300
NNSNWDWGSA IQLNGNDDLS ESLEKKENLL TWLLEDDDWG MDYNQLGDID SEVDLMLAWL  360
SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	2e-14	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW20268