PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19343

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 1182aa MW: 133264 Da PI: 6.7045

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19343	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.3	1e-21	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ +W +++iyr++++r++lt+GW+ Fv+ +++ +gD+v+F ++++++l+++ OIW19343 126 FCKTLTASDTSTHGGFSVPRRAAEKIfpaldySMQPPA-QELVAKDLHDTTWAFRHIYRGQPKRHLLTTGWSVFVSTKRVFAGDSVLFI--RDEKQNLLLG 223 99***************************9445444.38**********************************************..5689999999 PP EE-S CS B3 96 vfrk 99 ++r+ OIW19343 224 LRRA 227 9987 PP
2	Auxin_resp	123.1	2e-40	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s+F+++YnPras+seFv++++k++ka+ ++vs+GmRf+m+feteds rr++Gt++g+sdldpvrW+ S+Wr+L+ OIW19343 252 AAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKAMFTQVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPVRWKSSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1182 aa Download sequence
MKSLSNVSLP NSAEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ 60 TDFIPSYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VNKYEKEAIL ASDIGLKQNR 120 QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPALDYSMQ PPAQELVAKD LHDTTWAFRH 180 IYRGQPKRHL LTTGWSVFVS TKRVFAGDSV LFIRDEKQNL LLGLRRANRQ QTALSSSVIS 240 SDSMHIGILA AAAHAASNNS PFTIFYNPRA SPSEFVIPLA KYNKAMFTQV SLGMRFRMMF 300 ETEDSGVRRY MGTITGISDL DPVRWKSSQW RNLQIGWDES TAGERPSRVS LWEIEPVVSP 360 FYICPPQFLR SKFPRQPGMP DDDSDIENAF KRAMPWLGED FGMKDSSNSV FPGLSLMQWM 420 SMQQNNQFSA SQPAFFPSML SPNTLHSNLG TADPSKLLTF QDPSLSATSL QFNKPNLPNQ 480 INQLQQFPPA WPQLQQQQLL QQQQQQQQLQ QQQQQQQLQQ QQQQQQQLHQ QQQQQQLHQQ 540 QQQQQQQLHQ QQQQQQQMLQ NPQQQHHQLQ QTQQQHQLQS LLPTQVNQLQ QQRQHQLPEP 600 QNMPLLQQQQ PQMPQQLEKK PQLYQLAIVN NGTVSSNQNA NQFVQQPMAY SQFQQQQLLS 660 GGITPQQNIK STSKNTFPLT SLPQDSKSQQ QIDQQASLLQ RQQQNLQQSP LQLLQQNLTQ 720 RAMQQSPMTQ MSLQNPSEQQ LQLQFLQKLQ QQQQHLLSTS NPLLQSQFLQ QQSNHQQNQQ 780 LPQLPLSQHE PQQLGIGNNA LPTEKLLNSN NFTSSSALVQ SQQLPVNQSL NTQKSVTITR 840 APSTLTDGDA PSCSTSPSTN NCQISPPNLL KRNQQDPTTL GGSLVVDSRS NLIQELQSKP 900 EIQIKHEFHS IKGPDHKKYR GTIPDQLEAS FSGTSYCLDP GNVQQNLPLP NFFMDGDIQS 960 HSRNNLPFDS NLDGLTSDTM LLRGSDSQKD LQNLLANYGG APRDIETELS TADISSQSFG 1020 VPNVSFNPAC SSDVGMNDTG VLNNSVRANQ TQRVRTYTKV QKRGSVGRCI DVTRYKGYDE 1080 LRYDLARMFG IEGQLEDPQR TEWKLVYVDH ESDILLVGDD PWEEFVSCVQ SIKILSSAEV 1140 QQMSLDGDLG NVPIPNQASS GADSGNAWRG QYDDNSAASF NR

Sequence ? help Back to Top

Protein Sequence Length: 1182 aa Download sequence

MKSLSNVSLP NSAEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ  60
TDFIPSYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VNKYEKEAIL ASDIGLKQNR  120
QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPALDYSMQ PPAQELVAKD LHDTTWAFRH  180
IYRGQPKRHL LTTGWSVFVS TKRVFAGDSV LFIRDEKQNL LLGLRRANRQ QTALSSSVIS  240
SDSMHIGILA AAAHAASNNS PFTIFYNPRA SPSEFVIPLA KYNKAMFTQV SLGMRFRMMF  300
ETEDSGVRRY MGTITGISDL DPVRWKSSQW RNLQIGWDES TAGERPSRVS LWEIEPVVSP  360
FYICPPQFLR SKFPRQPGMP DDDSDIENAF KRAMPWLGED FGMKDSSNSV FPGLSLMQWM  420
SMQQNNQFSA SQPAFFPSML SPNTLHSNLG TADPSKLLTF QDPSLSATSL QFNKPNLPNQ  480
INQLQQFPPA WPQLQQQQLL QQQQQQQQLQ QQQQQQQLQQ QQQQQQQLHQ QQQQQQLHQQ  540
QQQQQQQLHQ QQQQQQQMLQ NPQQQHHQLQ QTQQQHQLQS LLPTQVNQLQ QQRQHQLPEP  600
QNMPLLQQQQ PQMPQQLEKK PQLYQLAIVN NGTVSSNQNA NQFVQQPMAY SQFQQQQLLS  660
GGITPQQNIK STSKNTFPLT SLPQDSKSQQ QIDQQASLLQ RQQQNLQQSP LQLLQQNLTQ  720
RAMQQSPMTQ MSLQNPSEQQ LQLQFLQKLQ QQQQHLLSTS NPLLQSQFLQ QQSNHQQNQQ  780
LPQLPLSQHE PQQLGIGNNA LPTEKLLNSN NFTSSSALVQ SQQLPVNQSL NTQKSVTITR  840
APSTLTDGDA PSCSTSPSTN NCQISPPNLL KRNQQDPTTL GGSLVVDSRS NLIQELQSKP  900
EIQIKHEFHS IKGPDHKKYR GTIPDQLEAS FSGTSYCLDP GNVQQNLPLP NFFMDGDIQS  960
HSRNNLPFDS NLDGLTSDTM LLRGSDSQKD LQNLLANYGG APRDIETELS TADISSQSFG  1020
VPNVSFNPAC SSDVGMNDTG VLNNSVRANQ TQRVRTYTKV QKRGSVGRCI DVTRYKGYDE  1080
LRYDLARMFG IEGQLEDPQR TEWKLVYVDH ESDILLVGDD PWEEFVSCVQ SIKILSSAEV  1140
QQMSLDGDLG NVPIPNQASS GADSGNAWRG QYDDNSAASF NR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	OIW19343