PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW19204 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 28094.7 Da PI: 4.9893 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.6 | 2e-20 | 85 | 134 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIrdp+ + +r++lg+f tae Aa a+++a+++++g OIW19204 85 HYRGVRQRP-WGKWVAEIRDPK----KaARIWLGTFETAEAAALAYDEAALRFKG 134 69*******.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDRRDGKRSL HSEEAEKEED NYEFPIYSER SQEDISAMVS ALTQVIGGIN NNDPVHILQD 60 PLTSGTQNQQ SQQLQEDQGE MRKIHYRGVR QRPWGKWVAE IRDPKKAARI WLGTFETAEA 120 AALAYDEAAL RFKGSKAKLN FPERVQPPIN QVPLGPPPHF SQQSYSNNPL QYAPLMGIDG 180 SSNNNNNINN FNYEVNGFYG NQPFTSASSE ITQQQQEFLR FSMQYGGSSS SYDQPTRSWM 240 DDNDGRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07310.1 | 3e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW19204 |