PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18493

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 391aa MW: 42620 Da PI: 6.8772

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18493	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.2	8.6e-40	80	197	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............. 88 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s + OIW18493 80 PPKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSTMSVPsqlrpsyfnpnfs 180 789******************************************************************99988888888888666666666677777777 PP TCP 89 ................k 89 + OIW18493 181 lpqqrrtlfpgigfssE 197 77765555555555331 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEEDDDDLHH QHQHHTQNFP FQLLHKKEDQ EPPSCSTVST YPTLAISPTE PTTSNSNRSN 60 QLVGSTPSTN IITEPSKKPP PKRASTKDRH TKVDGRGRRI RMPALCAARV FQLTRELGHK 120 SDGETIEWLL QQAEPSVIAA TGTGTIPANF TSLNISLRSS GSTMSVPSQL RPSYFNPNFS 180 LPQQRRTLFP GIGFSSENNN TSTLLNFQHS NNLTTLQAKQ ELREGVGGGQ SSSTTLDLSD 240 ANTVEGLETK TRPTEQDHSS TQHQIGSYLL QSSAGAIPAS QAQIPANIWM VAQATTSANS 300 NNQVMSHGDP IWTFPQVNNS AALYRGTAST GLHFMNYPTP MALLQGQQQF ASSMNEGHLS 360 MLAGLSPYRP VIGVSESQAS DDRHDSNTHH S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEEDDDDLHH QHQHHTQNFP FQLLHKKEDQ EPPSCSTVST YPTLAISPTE PTTSNSNRSN  60
QLVGSTPSTN IITEPSKKPP PKRASTKDRH TKVDGRGRRI RMPALCAARV FQLTRELGHK  120
SDGETIEWLL QQAEPSVIAA TGTGTIPANF TSLNISLRSS GSTMSVPSQL RPSYFNPNFS  180
LPQQRRTLFP GIGFSSENNN TSTLLNFQHS NNLTTLQAKQ ELREGVGGGQ SSSTTLDLSD  240
ANTVEGLETK TRPTEQDHSS TQHQIGSYLL QSSAGAIPAS QAQIPANIWM VAQATTSANS  300
NNQVMSHGDP IWTFPQVNNS AALYRGTAST GLHFMNYPTP MALLQGQQQF ASSMNEGHLS  360
MLAGLSPYRP VIGVSESQAS DDRHDSNTHH S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	6e-66	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW18493