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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW18116 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 301aa MW: 34121.2 Da PI: 8.6815 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 59 | 1.1e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd +l+ +++++G+g+W++I+ g++R+ k+c++rw +yl
OIW18116 14 KGPWTPEEDIILISYIQEHGPGNWRSIPTNAGLKRCSKSCRLRWTNYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 46.5 | 8.5e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w++
OIW18116 67 RGNFTNHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTN 111
89********************.*********.***********986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 301 aa Download sequence |
MGRPPCCDKI GIKKGPWTPE EDIILISYIQ EHGPGNWRSI PTNAGLKRCS KSCRLRWTNY 60 LRPGIKRGNF TNHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT NLKKKLKNQN 120 GYHKKGDSSN YSQQKGQWEK KLQTNIHMAK QALYEALSID KPSPASNATP AKQASSYASS 180 TENIAKLLQN WMKKSPNSSG NSFSNMVTTG SSSSEGAQSS TITCTPHDQA FDSVLSYNDV 240 YQSDNQCKTE CGCFQYENKQ YLERQVPLTV LEKWLFDDGE VQYHDENLMN ISLEESTTGL 300 F |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G47600.1 | 2e-93 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW18116 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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