PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18024

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 361aa MW: 40816.9 Da PI: 8.6064

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18024	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	125.6	2e-39	89	164	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 CqvegC dls+ak+yh +h+vC+ hsk+++v+++g+e+rfCqqCsrfh lsefDe+krsCrrrL++hn rrrk+q OIW18024 89 CQVEGCGLDLSSAKDYHCKHRVCDNHSKSSKVVIDGKERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNVRRRKPQ 164 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MSMYMFESSL DDSSGKNKLS EVEFSHVREL SSVSGEPLLS LKLGKRLYFE DVCTASNSKS 60 PLFSGAPMSS LSTSKKCKSN GQNAQFPHCQ VEGCGLDLSS AKDYHCKHRV CDNHSKSSKV 120 VIDGKERRFC QQCSRFHGLS EFDEKKRSCR RRLSDHNVRR RKPQPLPVRL NQPALSSLPH 180 DGKQHMSPFT YSRTATNLAW QQTHRSKLPQ TKDFLLNPAK ANNEIPSIGT MVSYDFETPF 240 TPKCIATKSI NTGIEDLITS SDPIVTQDFH RALSLLSTNS WGSHEPKPIP VEPPNKAAAT 300 LPVTHATSQQ RLPPEYWHIG QQPVNSNMWI SYSNCDDINR FQEFQLFREP YESGFPYNQL 360 D

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MSMYMFESSL DDSSGKNKLS EVEFSHVREL SSVSGEPLLS LKLGKRLYFE DVCTASNSKS  60
PLFSGAPMSS LSTSKKCKSN GQNAQFPHCQ VEGCGLDLSS AKDYHCKHRV CDNHSKSSKV  120
VIDGKERRFC QQCSRFHGLS EFDEKKRSCR RRLSDHNVRR RKPQPLPVRL NQPALSSLPH  180
DGKQHMSPFT YSRTATNLAW QQTHRSKLPQ TKDFLLNPAK ANNEIPSIGT MVSYDFETPF  240
TPKCIATKSI NTGIEDLITS SDPIVTQDFH RALSLLSTNS WGSHEPKPIP VEPPNKAAAT  300
LPVTHATSQQ RLPPEYWHIG QQPVNSNMWI SYSNCDDINR FQEFQLFREP YESGFPYNQL  360
D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	162	KKRSCRRRLSDHNVRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	4e-55	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW18024