PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17697

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 296aa MW: 33470.5 Da PI: 4.9881

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17697	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	115.6	3.1e-36	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 aCaaCk++rrkC+++C+lapyfpa+qpk f nvhklFG+sn++k+lk l+++++++am+s++ +A+ r + Pv+G+ + i +lq q++ +++el+++ ++ OIW17697 10 ACAACKYQRRKCTSECFLAPYFPADQPKVFLNVHKLFGVSNIVKILKILNPSQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQICAAEEELQVIYQQ 109 7*********************************************************************************************998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MTLKGGTTQA CAACKYQRRK CTSECFLAPY FPADQPKVFL NVHKLFGVSN IVKILKILNP 60 SQKKIAMDSI IIQANYRDKY PVHGCWEEIC RLQYQICAAE EELQVIYQQL EMCRQQQVQS 120 LPDYMNVASQ LELGMAAPNT NNALTLFNHS PQPQTYNDTM AAAALPASQQ HSYSNSNSVD 180 YNNCLYLESK DDTINPATNM WLQHHPYADN SSNSIAMQSQ FVTSQQLAIQ HETVEDYEEM 240 HPLFDAIDDR QSCIYSKEAY ASSSEESLKD TRNYAEHVAE NELKNAAACF SLTSVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	2e-44	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW17697