PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW16694 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 222aa MW: 24442.8 Da PI: 7.341 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 90.7 | 1.8e-28 | 4 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C++lr++C++dC+++p++ p++q++++ +++k++G++ +l+l++a+p+ r+ +++sl+yeA+ r+ +Pv G++g+++++++ +q++++++l OIW16694 4 SCNGCRILRKGCSDDCIIRPCLewinsPQSQANATLFLAKFYGRAGLLNLINAAPQPLRPGVFKSLMYEACGRIVNPVCGSLGLLWTGEWAHCQAAVDAVL 104 6***********************************************************************************************99998 PP DUF260 97 lkee 100 ++e OIW16694 105 NGSE 108 7765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MRLSCNGCRI LRKGCSDDCI IRPCLEWINS PQSQANATLF LAKFYGRAGL LNLINAAPQP 60 LRPGVFKSLM YEACGRIVNP VCGSLGLLWT GEWAHCQAAV DAVLNGSEIS AVELSDWQVT 120 PGIKHVFPAH DIRHVSRDTH VDQLRGERPR FRGTGNVIKP KAQVGSVDSA RLWKLGSGLT 180 QEQGNKEGWE TESEETVEAS LMSRDEPSRT GENKVCWELT LG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68510.1 | 4e-65 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW16694 |