PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW16139 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 220aa MW: 25168.6 Da PI: 9.0502 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.9 | 4.7e-18 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++ +G g+W++I++ g+ R++k+c++rw++yl OIW16139 13 KGAWSKQEDQKLIDYIQVHGEGCWSSIPKAAGLYRCGKSCRLRWLNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.6e-16 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg + ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ OIW16139 66 RGVFGQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 110 79999*****************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MRKPCCHKES TNKGAWSKQE DQKLIDYIQV HGEGCWSSIP KAAGLYRCGK SCRLRWLNYL 60 RPDIKRGVFG QDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH IKRKLINMGI 120 DPNNHKLHVH QIHATSASSS VSMKNDHRVS PYFKCYDAVN DEVLFSTCSD KKETTMVSSS 180 NLNLDLTIAL PSPRVDIVED KPTPNSESRT ERKETIHAWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 2e-74 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW16139 |