PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16122

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 459aa MW: 50813.5 Da PI: 6.7373

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16122	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.4	4.4e-15	60	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT eE++++++a k++G W +I +++g ++t+ q++s+ qk+ OIW16122 60 REKWTDEEHKKFLEALKLYGRA-WPRIEEHVG-TKTAVQIRSHAQKF 104 789***************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MAIQDQDGVT RLQGGLSQGN GVSSSPGVHS VTYIQPQDQF SSGNSNALKV RKAYTISKQR 60 EKWTDEEHKK FLEALKLYGR AWPRIEEHVG TKTAVQIRSH AQKFFSKVTR DSSGSNTSLV 120 ESIEIPPPRP KRKPMHPYPR KLVETRKKRV SNTEQPLRPC SLKSSHFDQE DISPKSVLSA 180 DVSEALGSSD SDTPTQSLSP LSSINGVHTS GFSHVEPKTS FEEHGSPPPA GLNTGLAHDE 240 QPLEKLELLH DESVSTKEVA AEESSGYTLK LFGTTLFVTD TSRPSSPSVE ACKPIPAPYY 300 TQLQSENSDI SESLSPIVPW WSISLDRPSM PLHKEHEGKH IDSNLMDFED KEVQKEGSST 360 GSNSNNSSVH DGENNESSGD QAKSHVTHVH CFNKVDELLN LLGRTNAQSE ISAISKLRVR 420 PNTSRKGFVP YKRCMAEREN HNLLVTGEEM EMQQIRLSL

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MAIQDQDGVT RLQGGLSQGN GVSSSPGVHS VTYIQPQDQF SSGNSNALKV RKAYTISKQR  60
EKWTDEEHKK FLEALKLYGR AWPRIEEHVG TKTAVQIRSH AQKFFSKVTR DSSGSNTSLV  120
ESIEIPPPRP KRKPMHPYPR KLVETRKKRV SNTEQPLRPC SLKSSHFDQE DISPKSVLSA  180
DVSEALGSSD SDTPTQSLSP LSSINGVHTS GFSHVEPKTS FEEHGSPPPA GLNTGLAHDE  240
QPLEKLELLH DESVSTKEVA AEESSGYTLK LFGTTLFVTD TSRPSSPSVE ACKPIPAPYY  300
TQLQSENSDI SESLSPIVPW WSISLDRPSM PLHKEHEGKH IDSNLMDFED KEVQKEGSST  360
GSNSNNSSVH DGENNESSGD QAKSHVTHVH CFNKVDELLN LLGRTNAQSE ISAISKLRVR  420
PNTSRKGFVP YKRCMAEREN HNLLVTGEEM EMQQIRLSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	149	KRKPMHPYPRKLVETRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	2e-48	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIW16122