PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW15588
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 908aa    MW: 100858 Da    PI: 5.485
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW15588genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.31.4e-23145245198
               EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
               f+k+lt sd++++g +++p+k ae+       ++++++ ++l+++d++  +W++++iyr++++r++lt+GW+ Fv +++L++gD+v+F   ++++ +l+++
  OIW15588 145 FCKTLTASDTSTHGGFSVPRKSAEKLfppldyKMQPPS-QELVVRDLHDATWTFRHIYRGQPKRHLLTTGWSIFVGSKRLRAGDSVIFI--RDEKSQLRIG 242
               99*********************999*****9666655.59************************************************..4566777999 PP

               EE- CS
        B3  96 vfr 98 
               v++
  OIW15588 243 VRS 245
               987 PP
2Auxin_resp112.73.5e-37271354183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+++s+F+++YnPra++seFv++++k++ka+  +++svGmRf m+fete+s +rr++Gt++gvsdldp+rWp+SkWr+++
    OIW15588 271 AAHAAANGSTFTIFYNPRACPSEFVIPLAKYRKAVFgTQLSVGMRFGMMFETEESGKRRYMGTIIGVSDLDPLRWPGSKWRNVQ 354
                 79********************************988********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 908 aa     Download sequence    
MVSLEEKIKT GGVVGGQTLA AEMKLLKEMQ EHCGARKALN SELWHACAGP LVSLPQEGTL  60
VYYFPQGHIE QVAASTRKST TSQIPNYPNL PSQLLCQVQN VTLHADKETD EIYAQMRLQP  120
LNSENDVFPV SDFGLKHSKH PSEFFCKTLT ASDTSTHGGF SVPRKSAEKL FPPLDYKMQP  180
PSQELVVRDL HDATWTFRHI YRGQPKRHLL TTGWSIFVGS KRLRAGDSVI FIRDEKSQLR  240
IGVRSVNRQQ STLPSSVLSA DSMHIGVLAA AAHAAANGST FTIFYNPRAC PSEFVIPLAK  300
YRKAVFGTQL SVGMRFGMMF ETEESGKRRY MGTIIGVSDL DPLRWPGSKW RNVQVDWDEP  360
GCGDKQNRVS VWEIETPESL FIFPSLTSGL KRPSQSGFLG NEWGNWVRRP FMRVPENGTH  420
ELPNSISNLY SEYMMRMPFN PQLVNNNSAF LRVMQHESAA TRCLLEENTT LAQDSQKVHP  480
SSESIPLKNL HSQSVPDQCN ALNLHSMSKS DQPDQIQPLA KNDNHDNSGT VSDKPKLESE  540
ALSENMFDIP AYPAIPQNLA SHMTFLNQNQ SPLLSQSCAW PMQQPQLESS TSHPQLLDMP  600
QSDPTIVNGM LPQLDIDEFM MYSSCRPLSD LHEHTALQNQ AANTPLPPMS QEVWDHYVMN  660
FNFSSQADQL TSMCPSGLYG LNGISSSTNM KDLSAESNNQ SEICVNVNVS NSKSTTTMVD  720
PSTSSAILDE FCTLKDKDFQ NPPDCMVGNL SSSQDVQSQI TTASLAESQA FNSGGTSLSH  780
IDFDHSSFLQ NNSWQQVAPP MRTYTKVQKA GSVGRSIDVT TFKNYEELIC AIECMFGLDG  840
LLNDTRGSGW KLVYVDYEND VLLVGDDPWE EFVGCVRCIR ILSPSEVQQM SEEGMKILNS  900
GALQGISG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein