PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15553

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 357aa MW: 41194.8 Da PI: 8.447

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15553	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4.1e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W t ++++g++R++k+c++rw++yl OIW15553 14 KGPWSPEEDSKLKFYIEKHGTGsNWLTLPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.6	2.5e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ OIW15553 69 GGFSEEEDNIICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGRAPCCDKS NVKKGPWSPE EDSKLKFYIE KHGTGSNWLT LPQKIGLKRC GKSCRLRWLN 60 YLRPNLRHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLWK 120 HRKEQQQALS NGGNNRAVKK ESNRESRSDS LSFVPENSTH HEQLYNWQQM PMLPLQPLPY 180 TNQSPSFNNE DSIKKFLRRF YDDNYHPTLD GLLNHHEFSN GIYKEQVHMV SSSACISNSN 240 INNNEVQYSQ TGQYGFDLVQ GQGSTFTSSI EEVVSTNTNN YPQRLDGLEF FYGEDIINNK 300 IMGSSSTSCS QSSNWGETNT QIYHHHPLVS SNYQVQGLIQ ETHNNVFLQK FSYREMQ

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGRAPCCDKS NVKKGPWSPE EDSKLKFYIE KHGTGSNWLT LPQKIGLKRC GKSCRLRWLN  60
YLRPNLRHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLWK  120
HRKEQQQALS NGGNNRAVKK ESNRESRSDS LSFVPENSTH HEQLYNWQQM PMLPLQPLPY  180
TNQSPSFNNE DSIKKFLRRF YDDNYHPTLD GLLNHHEFSN GIYKEQVHMV SSSACISNSN  240
INNNEVQYSQ TGQYGFDLVQ GQGSTFTSSI EEVVSTNTNN YPQRLDGLEF FYGEDIINNK  300
IMGSSSTSCS QSSNWGETNT QIYHHHPLVS SNYQVQGLIQ ETHNNVFLQK FSYREMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	5e-78	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW15553