PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW14894

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 269aa MW: 29534.1 Da PI: 6.6385

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14894	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.4	1.9e-19	5	50	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + OIW14894 5 KGPWSPEEDEALRRLVENHGPRNWTLISKSIP-GRSGKSCRLRWCNQ 50 79****************************.*********985 PP
2	Myb_DNA-binding	58.7	1.3e-18	59	101	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++ +G++ W+tIar ++ gRt++ +k++w++ OIW14894 59 PFTPEEDEAIIKAHADYGNR-WATIARQLN-GRTDNAIKNHWNST 101 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MDRIKGPWSP EEDEALRRLV ENHGPRNWTL ISKSIPGRSG KSCRLRWCNQ LSPEVEHRPF 60 TPEEDEAIIK AHADYGNRWA TIARQLNGRT DNAIKNHWNS TLKRKFSTVS ESVEDQRPLK 120 KSVSLGPGPT VSGSGSDLSE SSLAAPVLRP LLDTATVHVV ESASIAVDPL TSLSLSLPGS 180 DPNGFGSNKL SGSGPEVGVV VAEKNSEGRE EMSKEKQLFS EEFLTVLQEM VRTEVRNFMT 240 EVDHNNGLSS QTQAIRNAVM KHIGTGKVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	4e-69	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW14894