PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW14836

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 1006aa MW: 110435 Da PI: 5.4558

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14836	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.1	8e-24	155	255	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+lt sd++++g +++p++ ae+ +++++ ++l+++d+++++W++++iyr++++r++lt+GW+ Fv ++Lk+gD+v+F ++++ +l+v+ OIW14836 155 FCKTLTASDTSTHGGFSVPRRAAEKLfppldyAMQPPT-QELVVQDLHNNTWKFRHIYRGQPKRHLLTTGWSLFVGVKRLKAGDSVIFI--RDEKSQLLVG 252 99*******************999*9555544.49**********************************************..4567778999 PP EE- CS B3 96 vfr 98 ++ OIW14836 253 IRH 255 986 PP
2	Auxin_resp	111.3	9.8e-37	281	364	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPra++seFv++++k++ka++ ++vsvG Rf m+fete+s++rr++Gt+vg+ dldp+rWp SkWr+++ OIW14836 281 AAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVYgSQVSVGLRFGMMFETEESNKRRYMGTIVGICDLDPLRWPSSKWRNIQ 364 79********************************99*****************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1006 aa Download sequence
MRVERKENKN RMVSIEEGGG EVVGVQTLAA DIKLLKEMKE QHVVGKSFNT ELWHACAGPL 60 VSLPQVGSLA YYFPQGHSEQ LAASTRRTAA TSQVPNYPNL PSQLLCQVQN VTLHADQETD 120 EIYAQMSLQP LNSENDVFSI SEFGVKSSKH PSEFFCKTLT ASDTSTHGGF SVPRRAAEKL 180 FPPLDYAMQP PTQELVVQDL HNNTWKFRHI YRGQPKRHLL TTGWSLFVGV KRLKAGDSVI 240 FIRDEKSQLL VGIRHANRQQ TTLPSSVLSA DSMHIGVLAA AAHAAANRSP FTIFYNPRAC 300 PSEFVIPLAK YRKAVYGSQV SVGLRFGMMF ETEESNKRRY MGTIVGICDL DPLRWPSSKW 360 RNIQVEWDEP GCSEKQKRVS SWDIETPENF FMFPSLTSTL KRPLQSGLLE NDWNTLVRRP 420 FMRVPVNGTT EFSSTIPNLY QEQMMKFLLK PQLVNNTGTC SWVPQQEFAA KRGPSEEFKS 480 TLTTDNERIL ASSVGMPQKN LHYFQTEQDQ SNALNPPTKV DNPSSSGTVT DYLKLEPELL 540 SNHMFNFPSM EGCNGEKMST NSFNPESVAG QSTFLNQNQN PIGVDVPSSD SAIVDSLLTQ 600 LDSDEWMMYS SCQNGLTGPL SALQEHSALP SQAVDIPVPS VSQDMCDSYI KNSKFLTHAE 660 IYGLNCISSS INLRGLSVES NNQSEIYNSN NVIDVSNSAS ISIVDPPTSN AILDEFCTLK 720 GKDFLNPSDC MVSNISMNQD VQSQITSTSL AESRAFSVQD IHDNSGGASS SLVDFDESSF 780 LPNNSWSQQV SAQVARRRTY TKVQKAGSVG RSIDVTNFKN YEELINAIEC MFGLEGLLND 840 TKGSGWKLVY VDYEHDVLLV GDDPWKYVAK ATVFTFLNSC NPTIWLGTVS GNGATLLNGG 900 ELSIPLGSTI DLTAPAGWSG SLWARTGCNF DNFGNGKCAI GDCAGGLKCT SGGVPPVTVA 960 NFTIGTASNN KDFYSVSVAD GYNVAIGVTA HTVEVVIAST PVVLRT

Sequence ? help Back to Top

Protein Sequence Length: 1006 aa Download sequence

MRVERKENKN RMVSIEEGGG EVVGVQTLAA DIKLLKEMKE QHVVGKSFNT ELWHACAGPL  60
VSLPQVGSLA YYFPQGHSEQ LAASTRRTAA TSQVPNYPNL PSQLLCQVQN VTLHADQETD  120
EIYAQMSLQP LNSENDVFSI SEFGVKSSKH PSEFFCKTLT ASDTSTHGGF SVPRRAAEKL  180
FPPLDYAMQP PTQELVVQDL HNNTWKFRHI YRGQPKRHLL TTGWSLFVGV KRLKAGDSVI  240
FIRDEKSQLL VGIRHANRQQ TTLPSSVLSA DSMHIGVLAA AAHAAANRSP FTIFYNPRAC  300
PSEFVIPLAK YRKAVYGSQV SVGLRFGMMF ETEESNKRRY MGTIVGICDL DPLRWPSSKW  360
RNIQVEWDEP GCSEKQKRVS SWDIETPENF FMFPSLTSTL KRPLQSGLLE NDWNTLVRRP  420
FMRVPVNGTT EFSSTIPNLY QEQMMKFLLK PQLVNNTGTC SWVPQQEFAA KRGPSEEFKS  480
TLTTDNERIL ASSVGMPQKN LHYFQTEQDQ SNALNPPTKV DNPSSSGTVT DYLKLEPELL  540
SNHMFNFPSM EGCNGEKMST NSFNPESVAG QSTFLNQNQN PIGVDVPSSD SAIVDSLLTQ  600
LDSDEWMMYS SCQNGLTGPL SALQEHSALP SQAVDIPVPS VSQDMCDSYI KNSKFLTHAE  660
IYGLNCISSS INLRGLSVES NNQSEIYNSN NVIDVSNSAS ISIVDPPTSN AILDEFCTLK  720
GKDFLNPSDC MVSNISMNQD VQSQITSTSL AESRAFSVQD IHDNSGGASS SLVDFDESSF  780
LPNNSWSQQV SAQVARRRTY TKVQKAGSVG RSIDVTNFKN YEELINAIEC MFGLEGLLND  840
TKGSGWKLVY VDYEHDVLLV GDDPWKYVAK ATVFTFLNSC NPTIWLGTVS GNGATLLNGG  900
ELSIPLGSTI DLTAPAGWSG SLWARTGCNF DNFGNGKCAI GDCAGGLKCT SGGVPPVTVA  960
NFTIGTASNN KDFYSVSVAD GYNVAIGVTA HTVEVVIAST PVVLRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	OIW14836