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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW14830 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | SRS | ||||||||
| Protein Properties | Length: 295aa MW: 32621.3 Da PI: 6.3423 | ||||||||
| Description | SRS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF702 | 184.6 | 4.1e-57 | 95 | 228 | 3 | 153 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103
s +++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpaakrrerqqql askr+re++ +s ++ el +
OIW14830 95 SSGMNCQDCGNQAKKDCVHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLLRD----------TASKRHREHQG-LHSPPP-----VTTMGLELGV- 178
5689**********************************************9998763..........45677777522.222222.....2223334444. PP
DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
++P+ev+s+avfrcv+v++vd ee++aYq++++igGhvfkG+LydqG+e
OIW14830 179 QFPPEVNSTAVFRCVKVTAVDTPEEQYAYQASINIGGHVFKGVLYDQGPE 228
5***********************************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 295 aa Download sequence |
MAGLFSLGQQ NKEEEEENNN NRNSLFLFRD ENEEIYNKGF EIWPQSYHHH YSSFGVGPSS 60 RNSNVNNIVG DEHVSLSDES TRFGLMVMKS SGSSSSGMNC QDCGNQAKKD CVHLRCRTCC 120 KSRGFQCQTH VKSTWVPAAK RRERQQQLLR DTASKRHREH QGLHSPPPVT TMGLELGVQF 180 PPEVNSTAVF RCVKVTAVDT PEEQYAYQAS INIGGHVFKG VLYDQGPEGS YTNIEGSSGG 240 GGEGGEATQQ QLGLITSATT VTTTGNLFDP SSLYPPPLMN AFMAELWVME MVVLR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G75520.1 | 4e-62 | SRS family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW14830 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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