PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW14533

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 263aa MW: 28542.2 Da PI: 8.3405

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14533	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.5	1.7e-19	5	50	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + OIW14533 5 KGPWSPEEDEALQKLVETHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 50 79****************************.*********985 PP
2	Myb_DNA-binding	54	3.9e-17	59	101	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEd+ +++a+ ++G++ W+tIar ++ gRt++ +k++w++ OIW14533 59 PFSPEEDDAIIRAHSMFGNK-WATIARLLN-GRTDNAVKNHWNST 101 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MDRIKGPWSP EEDEALQKLV ETHGPRNWSL ISKSIPGRSG KSCRLRWCNQ LSPEVEHRPF 60 SPEEDDAIIR AHSMFGNKWA TIARLLNGRT DNAVKNHWNS TLKRKCSAVI VSDPDSPPLK 120 RSASLGAGTT ISGLFLNPES PSGSGFSDPG LPAIPTPQTK NDVSSTMDPP TLLTLSLPGS 180 GSSNNGSGSG SKQTPNSSPT QFIPSVPEKQ LFNEEFLAVM QEMIRDEVRS YMSGIEVQGG 240 MCVQQTEAIR NAVVKRMGVS NVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	3e-75	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW14533