PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW14468

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 346aa MW: 39422.6 Da PI: 9.6716

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14468	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	8e-18	20	65	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G +W++Ia++++ gR++k+c++rw++ OIW14468 20 RGHWRPAEDEKLRQLVEQFGAQNWNSIAQKLQ-GRSGKSCRLRWFNQ 65 899***************************.*********996 PP
2	Myb_DNA-binding	56.9	4.6e-18	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ OIW14468 72 RRPFTEEEEEKLLAAHRFHGNK-WALIARVFP-GRTDNAVKNHWHV 115 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MVYSSSVTGS TCEDTKTCPR GHWRPAEDEK LRQLVEQFGA QNWNSIAQKL QGRSGKSCRL 60 RWFNQLDPRI NRRPFTEEEE EKLLAAHRFH GNKWALIARV FPGRTDNAVK NHWHVIMARR 120 QREQSKLCGK RSFQELYNDS NTSSSNNNIN IFSESKRPKS HQDLLFNSRI GLENARFFDF 180 KNLDTPSSSL ATWNFASSFT ISTTTNTSNS TTLVADSFRK GGKDVYFNSS SVYLPQCSKS 240 SDRFLYRIYP NPTATTKSFG SFRGSNSTNS FSFPNYNRVV PSFFGFIGSS DHNGKLKRDM 300 KSFCDNSSTF TELKASSEKE QEDDEPNIEH KEVPFIDFLG VGVSSS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MVYSSSVTGS TCEDTKTCPR GHWRPAEDEK LRQLVEQFGA QNWNSIAQKL QGRSGKSCRL  60
RWFNQLDPRI NRRPFTEEEE EKLLAAHRFH GNKWALIARV FPGRTDNAVK NHWHVIMARR  120
QREQSKLCGK RSFQELYNDS NTSSSNNNIN IFSESKRPKS HQDLLFNSRI GLENARFFDF  180
KNLDTPSSSL ATWNFASSFT ISTTTNTSNS TTLVADSFRK GGKDVYFNSS SVYLPQCSKS  240
SDRFLYRIYP NPTATTKSFG SFRGSNSTNS FSFPNYNRVV PSFFGFIGSS DHNGKLKRDM  300
KSFCDNSSTF TELKASSEKE QEDDEPNIEH KEVPFIDFLG VGVSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-67	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW14468