PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW14059 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 169aa MW: 19654.9 Da PI: 10.2996 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 38.9 | 1.1e-12 | 11 | 50 | 3 | 42 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 i n+ +r+ t+ kR+n ++K +E+S+LC+++++ ii+ OIW14059 11 IVNDAKRNATYKKRKNSLIKMTKEISTLCGVDACAIIYNR 50 7899*********************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MARRNSKLAY IVNDAKRNAT YKKRKNSLIK MTKEISTLCG VDACAIIYNR NEFQPEVWPS 60 HSGVQSVLYK FLTFPPHEQS RKMFDQQSFL KQRIVKAQDQ LKKKKICNRK EMMSLLMFKC 120 LSTGFVEEDI DLQIAKDLLS VIDRNLNELD RKITTVQPEV GTFFATNRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48670.1 | 4e-38 | M-type_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW14059 |