PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW14056 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 159aa MW: 18665.6 Da PI: 10.474 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 44.4 | 2.1e-14 | 11 | 51 | 3 | 43 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43 i n+ +r+ t+ kR+n ++KK E+S+LC+++++ ii+ s+ OIW14056 11 IVNDAKRNATYKKRKNSLIKKTMEISTLCGVDACAIIYRSN 51 7899********************************99765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MARRNTKHAY IVNDAKRNAT YKKRKNSLIK KTMEISTLCG VDACAIIYRS NELQPEVWPS 60 HSGVQSVLYK FLTFPPLEQS RKMFDQQSFL KQRIVKAQDQ LQKKKIRNQN EMMSLFMFNC 120 LNTGFVNDNI NLQIAKDLLS VIDRNLNDLD RKITRDQHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48670.1 | 5e-38 | M-type_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW14056 |