PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13703

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 715aa MW: 78823.3 Da PI: 7.1207

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13703	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.3	8.2e-25	147	248	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + +++el+++ OIW13703 147 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGEDGELRLG 244 99**************************963.3445679********************************************..449999** PP EE-S CS B3 96 vfrk 99 ++r+ OIW13703 245 IRRA 248 *996 PP
2	Auxin_resp	116.8	1.8e-38	272	353	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+s +++F+v+YnPr+s+seF+++++k++k+l++++svGmRf+++feted++err++G+++g+sd+dpvrWp+SkWr+L OIW13703 272 VINALSARCAFSVCYNPRVSSSEFIIPLHKFSKSLDCSYSVGMRFRLRFETEDAAERRFTGLIAGISDVDPVRWPGSKWRCL 353 57899****************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MGLIDLNTTE DDETLSSSSS SSHSGISTCA SALPPPSVCL ELWHACAGPL ISLPKKGSVV 60 VYFPQGHFEQ QAQDFPITAY NISPHVFCRV LDVKLHAEEG SDEVYCQLLL VPENEKVEQN 120 LRAGELDADG EEEDAEAVVK STTPHMFCKT LTASDTSTHG GFSVPRRAAE DCFPPLDYSQ 180 QRPSQELVAK DLHGLEWKFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA VLFLRGEDGE 240 LRLGIRRAAQ LKSGTFAVPT SQQLNPSTLM DVINALSARC AFSVCYNPRV SSSEFIIPLH 300 KFSKSLDCSY SVGMRFRLRF ETEDAAERRF TGLIAGISDV DPVRWPGSKW RCLLVRWDDI 360 DAARHNRVSP WEIEPSGSAS SSSNLMAAGF KRSRIGLSSA KLEFPVPNGI GASDFGESSR 420 FRKVLQGQEM FGVNTPYDGI SAQSPRLSEF GRCYPSSGKN ARIPQVSSDF SSNGIGFSES 480 FRLQKVLQGQ EILPSQPYGR ALSMEEAHRN GRFGLFDGYY PMLGSRNGWS RQMHDNSSHL 540 HASVPSGQVS SPSSVLMFQQ SVNPVLNTNY NNIHNQEGKI HYHGSYASEM KGRTSADFTS 600 VQPIYSGHAQ EATNSFGMFN MHNQLAVSRS HESVSALIDS QEMASSCKSS CRLFGFSLTE 660 DRNIASKEAD PSTITCQLNS RPPFARHVDD EFHPGRALRN KAVVGSNCTK GVLQY

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MGLIDLNTTE DDETLSSSSS SSHSGISTCA SALPPPSVCL ELWHACAGPL ISLPKKGSVV  60
VYFPQGHFEQ QAQDFPITAY NISPHVFCRV LDVKLHAEEG SDEVYCQLLL VPENEKVEQN  120
LRAGELDADG EEEDAEAVVK STTPHMFCKT LTASDTSTHG GFSVPRRAAE DCFPPLDYSQ  180
QRPSQELVAK DLHGLEWKFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA VLFLRGEDGE  240
LRLGIRRAAQ LKSGTFAVPT SQQLNPSTLM DVINALSARC AFSVCYNPRV SSSEFIIPLH  300
KFSKSLDCSY SVGMRFRLRF ETEDAAERRF TGLIAGISDV DPVRWPGSKW RCLLVRWDDI  360
DAARHNRVSP WEIEPSGSAS SSSNLMAAGF KRSRIGLSSA KLEFPVPNGI GASDFGESSR  420
FRKVLQGQEM FGVNTPYDGI SAQSPRLSEF GRCYPSSGKN ARIPQVSSDF SSNGIGFSES  480
FRLQKVLQGQ EILPSQPYGR ALSMEEAHRN GRFGLFDGYY PMLGSRNGWS RQMHDNSSHL  540
HASVPSGQVS SPSSVLMFQQ SVNPVLNTNY NNIHNQEGKI HYHGSYASEM KGRTSADFTS  600
VQPIYSGHAQ EATNSFGMFN MHNQLAVSRS HESVSALIDS QEMASSCKSS CRLFGFSLTE  660
DRNIASKEAD PSTITCQLNS RPPFARHVDD EFHPGRALRN KAVVGSNCTK GVLQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	OIW13703