PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13595

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

FAR1

Protein Properties

Length: 668aa MW: 76451.2 Da PI: 8.0444

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13595	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.6e-21	51	144	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY e+Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel OIW13595 51 EFYTEFAKSCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTesgAPEWRVTGFANHHNHELL 144 6************9998877356667999*********99999999**************998766679***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MSEEAGSMLV VYDDTSSTEE STHQTSLSLE TTNDAIPYIG QRFPTHDAAY EFYTEFAKSC 60 GFSIRRHRTE GKDGVGKGLT RRYFVCHRAG NTPVKTSTES KPQRNRKSSR CGCQAYMRIS 120 KTTESGAPEW RVTGFANHHN HELLEPNQVR FLPAYRTISD ADKNRILIFA KTGISVHQMI 180 RLMELEKCVE PGYLPFTEKD VRNLLQSFRK IDPEEESLDL LRMCRNIKDK DPNFKFEYTL 240 DINNRLENIA WSYASSIQLY DIFGDAVVFD TTHRLTAFDM PLGIWVGMNN YGMPCFFGCV 300 LLRDETMRSF SWALKVFLGF MNGKAPQTIL TDQNICLKEA LSMEMPTTKH AFCIWMVVAK 360 FPSWFNAVLG ERYNEWKAEF YRIYNLESVE DFELGWREMV CSFGLHSNRH MVTLYSSRSF 420 WALPFLRSHF LAGMTTTGQS KSINAFIQRF LSAQTRLAHF VEQVAVAVDF KDQTGEQQTM 480 QQNLQNVCLK TGAPMESHAA TILTPFAFSK LQEQLVLAAH YASFPIEDGF LVRHHTKAEG 540 GRKVYWAPQE GIISCSCHQF DFSGTLCRHS LRVLSTGNCF QIPDRYLPIR WRRISMPSSK 600 LLQSAPNDHA ERVQLLQNMV SSLITESAKS KERLDIATEQ VSNLLSRIRE QPISLQGVKD 660 VSSINRNV

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MSEEAGSMLV VYDDTSSTEE STHQTSLSLE TTNDAIPYIG QRFPTHDAAY EFYTEFAKSC  60
GFSIRRHRTE GKDGVGKGLT RRYFVCHRAG NTPVKTSTES KPQRNRKSSR CGCQAYMRIS  120
KTTESGAPEW RVTGFANHHN HELLEPNQVR FLPAYRTISD ADKNRILIFA KTGISVHQMI  180
RLMELEKCVE PGYLPFTEKD VRNLLQSFRK IDPEEESLDL LRMCRNIKDK DPNFKFEYTL  240
DINNRLENIA WSYASSIQLY DIFGDAVVFD TTHRLTAFDM PLGIWVGMNN YGMPCFFGCV  300
LLRDETMRSF SWALKVFLGF MNGKAPQTIL TDQNICLKEA LSMEMPTTKH AFCIWMVVAK  360
FPSWFNAVLG ERYNEWKAEF YRIYNLESVE DFELGWREMV CSFGLHSNRH MVTLYSSRSF  420
WALPFLRSHF LAGMTTTGQS KSINAFIQRF LSAQTRLAHF VEQVAVAVDF KDQTGEQQTM  480
QQNLQNVCLK TGAPMESHAA TILTPFAFSK LQEQLVLAAH YASFPIEDGF LVRHHTKAEG  540
GRKVYWAPQE GIISCSCHQF DFSGTLCRHS LRVLSTGNCF QIPDRYLPIR WRRISMPSSK  600
LLQSAPNDHA ERVQLLQNMV SSLITESAKS KERLDIATEQ VSNLLSRIRE QPISLQGVKD  660
VSSINRNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein

Link Out ? help Back to Top
Ensembl	OIW13595