PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW13441 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 412aa MW: 46309.9 Da PI: 8.3148 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ v+++G g+W+++++ g+ R++k+c++rw +yl OIW13441 14 KGLWSPEEDEKLLRHVTKHGHGCWSSVPKQAGLERCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 45 | 2.6e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ OIW13441 67 RGTFSQQEENLIIELHAILGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*******************.*********.*********9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHVT KHGHGCWSSV PKQAGLERCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIIE LHAILGNRWS QIAAQLPGRT DNEIKNLWNS SLKKKLRQKG 120 IDLITHKPLS EVENVENKIR DQKKVPKELS NELNLMNSES SKSDGASSIA TKGYATEIEG 180 STSSKIMMKN CSSKDFFLDK FMSSNHENYT NLIGNYPIHM SYASSIDQTL PTNSNSSHWC 240 SQSGKSFDMN SEFISNSINV MSIIPPTTTT SFLPTSFCYK PSLPVPSDDI STPSFAANGS 300 YYWEAATSNN SKSSNRSNGS KDLTSNNNSF MESQVEEAKW YEYLHNPMLM LSSVQNQSSE 360 SLCSEIKAET YLVPDTSGAV LPHSKQQQQP SQSTNIFSKD MHKLTAAFGH IE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | LKKKLRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 1e-82 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW13441 |