PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13434

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 402aa MW: 45587.8 Da PI: 6.8349

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13434	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	6.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++ G g+W+++++ g+ R++k+c++rw +yl OIW13434 14 KGLWSPEEDEKLLNFITNNGHGCWSSVPKLAGLMRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	44.4	3.8e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ OIW13434 67 RGAFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MGRHSCCYRQ KLRKGLWSPE EDEKLLNFIT NNGHGCWSSV PKLAGLMRCG KSCRLRWINY 60 LRPDLKRGAF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SMKKKLKQKG 120 IDPNTHQPLH EVENNKPPST NNKSNNDLKT SLGSNNEVMG LHIHKQSSNS KPKNPTSMPI 180 EQYPLEVSSS YKINNHNNNT NQKLFLDNNT FGISTHDRTI ISYKTSDIVE ETFYSLYEPN 240 MGFTTSNHNT SLCFMPNSTS SHVISELNST KNASFISFGD IDGIQNWELS NSIGSINSSS 300 IQLQTSTDFL NTTWGLAESA TAKAYDNDVD NVHVHVVPSL QEDVKLCEYF NTAPFFVGNI 360 NTVQDQIQNY VYSDEVIKPE NGFIIDEAST FWNNNYGMQL RF

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MGRHSCCYRQ KLRKGLWSPE EDEKLLNFIT NNGHGCWSSV PKLAGLMRCG KSCRLRWINY  60
LRPDLKRGAF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SMKKKLKQKG  120
IDPNTHQPLH EVENNKPPST NNKSNNDLKT SLGSNNEVMG LHIHKQSSNS KPKNPTSMPI  180
EQYPLEVSSS YKINNHNNNT NQKLFLDNNT FGISTHDRTI ISYKTSDIVE ETFYSLYEPN  240
MGFTTSNHNT SLCFMPNSTS SHVISELNST KNASFISFGD IDGIQNWELS NSIGSINSSS  300
IQLQTSTDFL NTTWGLAESA TAKAYDNDVD NVHVHVVPSL QEDVKLCEYF NTAPFFVGNI  360
NTVQDQIQNY VYSDEVIKPE NGFIIDEAST FWNNNYGMQL RF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	7e-87	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW13434